| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1291 |
|---|
| Symbol | |
|---|
| ID | 4032132 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1455533 |
|---|
| End bp | 1456237 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637969768 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_576576 |
|---|
| Protein GI | 92116847 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAG GGTCTTTCGT GATCCCACAG CCGCCCCAGG CCGCTATTGC GGTCGCGGGT
GAAGGCGGAT TTTTTCCGGT CCGCCGCATC TGGTGCGTCG GCCGCAATTA TCTCGACCAT
ATCCGAGAGA TGGGCAACGA CGAGCGCGCG CCACCGTTCT TCTTCGCAAA GCACCCCGAC
ATGATTGAGC CAGACGGCGC GGTCATCCCC TATCCGCCGC TGACCAGCGA CCTGCATCAC
GAGGTCGAGC TGATCGTCGC GATGAAGGGC GGAGGCCTGC GCATCCCCGC CGACAAGGCG
CTCGACCACG TCTACGGCTA CGCCGTCGGT ATCGACCTCA CCCGGCGCGA CCTGCAGAAC
GCCGCGCGCA AGAAGGAGCG GCCCTGGGAG ATCGGAAAAT CGTTCGATCA CTCCGCGCCG
TCGAGTCCGA TCCAGCAGGC CGCGAAGATC GGCCATCCGT CGAAGGGCCG CATCTGGCTC
ACGGTCAACG GCAAGGAGGC CCAGGCCGGC GATCTCGCGC AGATGATCTG GAACGTGCCG
GAGATCGTCT CGCAGCTCTC GCAACAGGTC GAGCTTCGGG CCGGCGACAT CATCATGACC
GGCACGCCCG CCGGCGTCTC CCGGCTCCAG CCTGGCGACG AGATCGCGTG CGGCTGCGAC
GGCGTCGGCA CGCTGAAGGT GACGATCGGT CAGCCGGCGG CTTGA
|
|---|
| Protein sequence | MSAGSFVIPQ PPQAAIAVAG EGGFFPVRRI WCVGRNYLDH IREMGNDERA PPFFFAKHPD
MIEPDGAVIP YPPLTSDLHH EVELIVAMKG GGLRIPADKA LDHVYGYAVG IDLTRRDLQN
AARKKERPWE IGKSFDHSAP SSPIQQAAKI GHPSKGRIWL TVNGKEAQAG DLAQMIWNVP
EIVSQLSQQV ELRAGDIIMT GTPAGVSRLQ PGDEIACGCD GVGTLKVTIG QPAA
|
|---|
| |