| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1287 |
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| Symbol | lpxC |
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| ID | 4032128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1449196 |
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| End bp | 1450152 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637969764 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_576572 |
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| Protein GI | 92116843 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.809144 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA ACCGCCAGAC GACGCTTCGT TCGCAAGCCA CCGTGACGGG TGTCGGTGTT
CATTCCGGAT CACCTGTCAG TCTGACCCTT GGGCCTGCCT CGATCGATGC GGGTTTTATT
TTTATCCGGA CCGGCGCCGA TGGAATTGAA CGCCGGGTGC CAGCCGTCGC GAAATCCGTC
ACATCGACCG AATTCGCCAC GGTGCTGGGC GACCAGCAGG GCCCGCTTGT CTCCACCGCC
GAGCACGTCC TTGCCGCGCT GCGCGGCATC GGCGTCGACA ATGCCACCAT CGAAATCGAC
GGGCCTGAAG TGCCGATCAT GGACGGCAGT TCGACTGCAT TCGTCGCCGC GATCGACCAG
GCCGGCATCG TCGAGCAGTC TGCGGCGCGC CGCTTCATTC AGGTGCTCAA ACCGGTGCGG
GTGAAGAGGG GCGAGGCCTT CGGCGAGCTG CGTCCATACG GGCGCGGTCT CCGCGTTGAG
GTCGAGATCG ATTTCGCCAA TCCGGTGATC GGTCATCAGG ATTATGCCCT CGATCTCAAC
CCCGAAACCT TCCGCCGCGA AATCAGCCGC GCCCGTACCT TTGGCTGCTT GAACGATGTC
GCGAAGCTCT GGAGGGCCGG CTTCGCGCGG GGCGCCTCCT TTGAAAACTC CATGGTGTTC
GACGACGAGC GCCTGTTGAA TGTCGGGGGC CTGCGCTACG CCGACGAGTG CGCGCGACAC
AAGGTTCTCG ATGCGATCGG CGATCTTGCA CTCGCAGGGT TGCCGCTGAT CGGCGGCTAT
CACTCGGTAT GCGGCGGGCA CAAGCTCAAC CATGCCGTTC TCTCGGCCCT GATGGCCGAT
CGGACCGCCT GGCGGGTGGT CGAGGGCCAG CCGGCCTCGC GTCCGCGCAG TCAGGGCGAA
GCGGTCGGCG GAATGGTTGG CGGCATGGTT GCGGCCTACG GTCCCAACGT GTCCTGA
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| Protein sequence | MKFNRQTTLR SQATVTGVGV HSGSPVSLTL GPASIDAGFI FIRTGADGIE RRVPAVAKSV
TSTEFATVLG DQQGPLVSTA EHVLAALRGI GVDNATIEID GPEVPIMDGS STAFVAAIDQ
AGIVEQSAAR RFIQVLKPVR VKRGEAFGEL RPYGRGLRVE VEIDFANPVI GHQDYALDLN
PETFRREISR ARTFGCLNDV AKLWRAGFAR GASFENSMVF DDERLLNVGG LRYADECARH
KVLDAIGDLA LAGLPLIGGY HSVCGGHKLN HAVLSALMAD RTAWRVVEGQ PASRPRSQGE
AVGGMVGGMV AAYGPNVS
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