| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1283 |
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| Symbol | |
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| ID | 4032182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1443108 |
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| End bp | 1444130 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969760 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_576568 |
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| Protein GI | 92116839 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCATCA CCATTCTTTT TGGCGGCAGC AACAAGGAGC GTCTCGTCTC GGTGGCGAGC
GCGCAGGCGC TGCACCGCGC CCTGCCGGAG GCGGACCTGT GGTTCTGGGA TATACGTGAC
GATGTCCATA ACGTGCGTTC CGAGGTGCTG CTTGATCATG CGCGGCCGTT CGAGGACGAG
TTCGTCCCCG GCGGGACCAG TATGCCGTTT GAGCAGGCGC TCGACCGGGC CAGGGCCGAG
GGCCGCGTGC TGGTGCTCGG CCTTCATGGC GGCCGCGCCG AAAACGGCGA GCTGCAGGCG
ATGTGCGAAC TGCGCGGCAT TCCCTTTACA GGATCGGGCT CGGCCGCCTC GCACCTTGCG
TTCGACAAGG TCGCGGCCAA GCGGTTCGCG GCGTTGGCGG GCGTCACCAC GCCTGCCGGC
GTACCGCTGG AGGAAATCGA CCGCGCATTC GCCGAGCACG GCCGGCTGAT CGCAAAGCCC
GCGCGCGACG GATCGAGCTA TGGACTGATC TTCGTCAACG CGAAGCAGGA TTTCGTTGCC
GTCCGCCATG CGGCGAAGAC CGAGGAATAT GTGATCGAGC CGTTCGTGTC CGGCATCGAG
GCGACCTGCG GCGTGCTGGA GCGCTCCGAC GGCACCGTCG TCGCGCTTCC GCCGGTCGAG
ATTGTGCCGG CGGAGGGCCG GTTCGACTAC GCCTCGAAAT ATCTGGCCCA AACGACGCAG
GAGATCTGCC CCGGCCGGTT TTCGTCCTCT ATCACCGCGC GGATCATGGA TCACGCGCTG
CGGGCGCATC GTGCACTGTC TTGCCGTGGC TATTCCCGCA CCGACTTCAT CGTGACCGGC
AAGGAACCGG TCTATCTCGA GACCAACACC CTGCCGGGTC TGACCGCGGC CTCGCTCTAT
CCCAAGGCGC TCAAGGCGCA GGGGATCGGA TTCGCGGATT TTCTACGCGA TCAGATCGTA
CTTGCCGAAA AGGCCGGCCG CCCGGCTCAT AGCGTTTTCA GCGAAGCATG TCCTCGGGCG
TGA
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| Protein sequence | MRITILFGGS NKERLVSVAS AQALHRALPE ADLWFWDIRD DVHNVRSEVL LDHARPFEDE
FVPGGTSMPF EQALDRARAE GRVLVLGLHG GRAENGELQA MCELRGIPFT GSGSAASHLA
FDKVAAKRFA ALAGVTTPAG VPLEEIDRAF AEHGRLIAKP ARDGSSYGLI FVNAKQDFVA
VRHAAKTEEY VIEPFVSGIE ATCGVLERSD GTVVALPPVE IVPAEGRFDY ASKYLAQTTQ
EICPGRFSSS ITARIMDHAL RAHRALSCRG YSRTDFIVTG KEPVYLETNT LPGLTAASLY
PKALKAQGIG FADFLRDQIV LAEKAGRPAH SVFSEACPRA
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