| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1277 |
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| Symbol | murD |
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| ID | 4032176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1436077 |
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| End bp | 1437477 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637969754 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_576562 |
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| Protein GI | 92116833 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.396011 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCCG TCACCTCCTT CGCCGGCAAG ACGGTCGCGG TGTTCGGCCT TGGCGGCTCC
GGCCTTGCAA GCTGTCACGC GCTGAAGGCC GGCGGCGCCG AAGTGATCGC GGGCGACGAC
AACGCCGACA ATCTCGCCAA GGTGGCGCAG GCCGGCTTCA TCACTGCCGA TCTGCGCAAC
GTATCGTGGG TAAATTTCGC CGCGCTGGTG CTGGCGCCCG GCGTGCCGCT GACCCATCCG
AAGCCGCACT GGAGTGTGCT GGCGGCACGA CAGGCCGGCG TCGAGGTGAT CGGCGATATC
GAACTGTTCT GCCGCGAGCG CGCACGCCAC GCGCCCGATG CGCCCTTCGT CGCCATCACC
GGCACCAACG GCAAGTCCAC CACCACGGCG CTGGTCGCGC ATCTGATGCG CGAGGCCGGG
CACGACGTGC AGATGGGCGG CAACATCGGC ACCGCGATCC TGTCGCTGGA GCCGCCGCGC
AAGGGGCGTG TGCATGTGAT CGAGATGTCG TCGTACCAGA TCGACCTCAC GCCCTCGCTC
GATCCGACCG TCGGCATCCT GCTCAATGTC AGTCCCGATC ATCTCGATCG CCACGGCACC
ATCGAGCATT ACGCGGCGGT GAAGGAACGG CTGATCGCCG CCGTGCAGCC GCATGGCACG
GCTGTCGTCG GCGTCGACGA TATCTGGAGC CGCACCGCGG CGGATCGCAT CGAACAGGCC
GGCAAGCGCG TGGTGCGCGT CTCGGTGAAG CGGCCGCTGG CGGATGGCAT CAGCGTCGAT
CACGACAGGA TCGTGCGCGC CTCCGGTGGC GCGCAGGCCG AAATCGCCGA TATCGGCGGC
ATCGGCTCGC TGCGCGGGCG GCACAATGCG CAGAATGCCG CGTGCGCTTC GGCGGCGGCG
CTCGCGCTCG GCGTCGGCCG CGACATCCTG CAACAGGACT TGCGCAGTTT TCCCGGCCTC
GCGCACCGCA TGGAACAGGT GGGACGCAAG GCCAACGTGC TGTTCGTCAA CGACTCCAAG
GGCACCAATG CCGACGCCAC CGAAAAGGCG CTGTCGTCCT TCGCCGAGAT TTTCTGGATC
GCGGGCGGCA AGCCGAAAAG CGGCGGCATC GCCCCGCTCG CCGAGTTATT CCCGCGCATC
CGGAAAGCCT ATCTGATCGG CGAGGCGGCG GAGGAATTCG CGGGCACGCT GGAGGGCAGG
GTGGTTTACG AGATCAGCGG GACGCTGGAG GCCGCAGTGC CTGCCGCCGC GCGTGATGCG
GAAGGCTCCG GCCTTGCGGA CGCCGTGGTG CTGTTGTCGC CGGCCTGCGC TTCGTTCGAT
CAGTTCCGCA ATTTCGAGGC TCGCGGCGAC CGTTTCCGCG AGCTGGTGCG GGCGCTGCCG
GGCGTGACGC CGGTCGCGTG A
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| Protein sequence | MIPVTSFAGK TVAVFGLGGS GLASCHALKA GGAEVIAGDD NADNLAKVAQ AGFITADLRN
VSWVNFAALV LAPGVPLTHP KPHWSVLAAR QAGVEVIGDI ELFCRERARH APDAPFVAIT
GTNGKSTTTA LVAHLMREAG HDVQMGGNIG TAILSLEPPR KGRVHVIEMS SYQIDLTPSL
DPTVGILLNV SPDHLDRHGT IEHYAAVKER LIAAVQPHGT AVVGVDDIWS RTAADRIEQA
GKRVVRVSVK RPLADGISVD HDRIVRASGG AQAEIADIGG IGSLRGRHNA QNAACASAAA
LALGVGRDIL QQDLRSFPGL AHRMEQVGRK ANVLFVNDSK GTNADATEKA LSSFAEIFWI
AGGKPKSGGI APLAELFPRI RKAYLIGEAA EEFAGTLEGR VVYEISGTLE AAVPAAARDA
EGSGLADAVV LLSPACASFD QFRNFEARGD RFRELVRALP GVTPVA
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