Gene Nham_1266 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1266 
Symbol 
ID4032165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1423812 
End bp1424834 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content65% 
IMG OID637969744 
Producttransposase, IS4 
Protein accessionYP_576552 
Protein GI92116823 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGGTG GTGACAGTCT GACTGGCGAG TTGTTCAGCT ACGTTGATCT GGAGGCGCGG 
GTTCGACGCG ATCACCCGCT TCGCGCCATC CGGGTCATGG TGAACGAAGC GCTTGTCGCT
TTCGAGCGGG AGTTCGCGGC GCTGTATTCG CCGATCGGGC GGCCGTCGAT CCCACCCGAG
AAGTTGCTCA GGGCGATGCT CTTGCAGGCG TTCTACTCGA TCCGCTCGGA GCGGTTGCTT
ATGGAGCGGC TGGAATACGA CCTTCTGTTC CGCTGGTTCG TGGGCATCGG CGTCGACGAT
CCGGCCTGGG ACCATTCGGT GTTCTCGAAG AACCGCGACC GGCTGCTTGA GGTTGACATC
GCGGCAAAGT TCCTGAGTGC GGTGCTGGCC CAGCCCAAGG TGAAGAAGCT GCTGTCGAGC
GATCACTTCT CGGTCGACGG CACGCTGATC GAGGCCTGGG CTTCGATGAA GAGCGTCAAA
CCGAAGGACG GCTCTGGCGA GCCGCCGGCC GGCGGCGCCG GGCGCAATGC CGAAGCCGAC
TTCCACGGCC AGACGCGGAC TAACGACACG CCTGCCTCAA CCACCGATCC GGACGCAAGG
CTCTACAAGA AGGGCAAGGG CAAGGAGGCG AAGCTGTGCT TCATGGGTCA TGGGCTGATG
GAGAACCGCC ACGGCCTGTT GGTCGACGCC TGCCTGACGC TGGCCGACGG ACATGCCGAG
CGGGTGGCGG CGTTGCACAT GATCGAACCT CGCGCCGACC GGCCCCTGGC CATCACACTT
GGCGCTGATA AGGCCTATGG CACGGAGGGC TTCGTCAACG AGCTGCGCGC GATGAAGGTG
ACGCCGCACG TGGCGCAGAA CACGAGCGGC CGGAGCTCGG CGATCGACGG ACGCACAATG
CGGCACAGCG GCTATGCCGT CAGCCAGCGT ATCCGCAAGC GCATTGAGGA AGCCTTCGGC
TGGATCAAGA CGGTCGCCAG CCAGGACAAG ACCCGCTTCC GCGGCCGCGA CCGCGTCGGA
TAG
 
Protein sequence
MRGGDSLTGE LFSYVDLEAR VRRDHPLRAI RVMVNEALVA FEREFAALYS PIGRPSIPPE 
KLLRAMLLQA FYSIRSERLL MERLEYDLLF RWFVGIGVDD PAWDHSVFSK NRDRLLEVDI
AAKFLSAVLA QPKVKKLLSS DHFSVDGTLI EAWASMKSVK PKDGSGEPPA GGAGRNAEAD
FHGQTRTNDT PASTTDPDAR LYKKGKGKEA KLCFMGHGLM ENRHGLLVDA CLTLADGHAE
RVAALHMIEP RADRPLAITL GADKAYGTEG FVNELRAMKV TPHVAQNTSG RSSAIDGRTM
RHSGYAVSQR IRKRIEEAFG WIKTVASQDK TRFRGRDRVG