| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1253 |
|---|
| Symbol | |
|---|
| ID | 4032190 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1413980 |
|---|
| End bp | 1415410 |
|---|
| Gene Length | 1431 bp |
|---|
| Protein Length | 476 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637969732 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_576540 |
|---|
| Protein GI | 92116811 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5361] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.881685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGC ATCTGTCGTC GCTTGCTGCG GTATTGTCGG GTCTAACCCT TATAGTCTCG
ACATTGGCTC CGAGCGCTGC CCAATCGATT TTCGCGAACG AGGCACAAGC TATCGCTGTG
GAGGCGTATG TCTACTTCTA TCCGCTCGTG ACGATGGACG TGACGCGCAA GCAGCTCAAC
AATTCCGATC CGAAGACCGC AGGTATCGGC GGCGCTCCCA ACGCGTTCAA TAATATCCAG
GCCTACCCCA CTGCGGACAC CAGGGCAGTG GTACGACCCA ACTTCGACAC GCTGTACTCG
AGCGCCTGGC TGGACCTGAC GCGCGAGCCC ATGATCGTTT CGGTTCCTGA TACCGGCGGC
CGCTACTACC TGCTACCGAT GCTCGACATG TGGACAGATG TGTTCGCGTC GCCAGGATCG
CGCACGACAG GCACCGAGGC GGCCAATTTC CTGGTTGCAC CTCCAGGCTG GAATGGGAGC
GTGCCGGAGG GCGTTACGCG CATCAATGCG CCGACGCCCC ATGTCTGGAT AATCGGTCGC
ACCAGGACAG ATGGTCCCGC CGACTATGCC TCAGTCCACG AAGTACAGAA GGGCTACAGG
ATCACGCCGC TATCAGGATG GGGCAAACCC CCGGTCGCCG TCACGCAAAC CATCGACCCC
AGCGTCGATG TCAAGACTCC GCCGAAGACG CAAGTTGATA CGATGGCGGG CGATAAGTTC
TTTGCGTATG CAGCCGAGCT ACTCAAAGTC AACCCGCCGC ACATCACCGA TGAGCCGATT
ATTGCGCGCA TGAAGCGGAT TGGCCTCGAA CAGGGCAGGA GCTTCGACAT TACCAAAGTT
GACGCAACCG CAAGGAAAGC CATCGAAGAC GCGCCGGCAC AAGGTCACAA GCTGATGGCA
TGGAAGGTCC CGACATTGGC GCGCGTAGCA AACTACTGGT CCATGAATAC TGACACGATG
GGCGTTTACG GGACCTATTA TTTGAAGCGT GCGATCGTAG CGCAGATTGG ACTTGGTGCT
AATCTGCCGG AAGATGCGAT CTACCCGGTC AGTATCGGCG ATGAAAACGG AAAACCGCTC
GACGGTGCAA ACAAGTACAT CATCCGCTTC GCTAAAGACG CGCTGCCGCC GGTCGGCGCA
TTCTGGTCTG TCACCCTATA TGACAATGAA GGCTTCCAGG TTGCGAATCC GGCTAATCGC
TTTGCGGTTA GTAGCTGGAT GCCGTTCAAG CGCGACGCCG ACGGGTCGTT GACGCTCTAC
GTCCAGAACG AGAATCCCGG CAGCGATCAC GAAACCAACT GGCTGCCTGC ACCTAAAGGC
CCGTTCAATC TCACCATGCG TCTCTATGCG CCGAAGTCGG AGGCGTTGAC TGGTGTATGG
AATCCGCCGG CCATCAAGCG GATGGACAGT GACACTGTTG GCCGGCGGTG A
|
|---|
| Protein sequence | MNKHLSSLAA VLSGLTLIVS TLAPSAAQSI FANEAQAIAV EAYVYFYPLV TMDVTRKQLN
NSDPKTAGIG GAPNAFNNIQ AYPTADTRAV VRPNFDTLYS SAWLDLTREP MIVSVPDTGG
RYYLLPMLDM WTDVFASPGS RTTGTEAANF LVAPPGWNGS VPEGVTRINA PTPHVWIIGR
TRTDGPADYA SVHEVQKGYR ITPLSGWGKP PVAVTQTIDP SVDVKTPPKT QVDTMAGDKF
FAYAAELLKV NPPHITDEPI IARMKRIGLE QGRSFDITKV DATARKAIED APAQGHKLMA
WKVPTLARVA NYWSMNTDTM GVYGTYYLKR AIVAQIGLGA NLPEDAIYPV SIGDENGKPL
DGANKYIIRF AKDALPPVGA FWSVTLYDNE GFQVANPANR FAVSSWMPFK RDADGSLTLY
VQNENPGSDH ETNWLPAPKG PFNLTMRLYA PKSEALTGVW NPPAIKRMDS DTVGRR
|
|---|
| |