| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1245 |
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| Symbol | |
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| ID | 4032239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1403703 |
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| End bp | 1405634 |
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| Gene Length | 1932 bp |
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| Protein Length | 643 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969723 |
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| Product | AsmA |
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| Protein accession | YP_576532 |
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| Protein GI | 92116803 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.350704 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGCC TGGGAATATC GGTCGCGGCC ATTCTGGGAG TTGCGCTGAT CGGGCTGACC
GGGCTGATCT CCATGTCGCG GCTGCTCGAC CGCGACGCCT TGCGCCAGGC GGTGGAAACG
CAGATCAGCG CCGTAACAGG CCTCGACTTC GTCGCCGACG GCCGCATCGA CGTCTCGGTT
TTTCCCGGCA GCTATGTCTC GTTCCATGAT GTCCGCATCA AGGGCAGCGA CGCCGGCGCT
CCCGCGCTCA GTGTCGATGT GCTGACCGCC AATCTGCGCC TGCTTCCGCT GCTGATGCAG
CGCTTCCAGA TCGCCGACAT CATGTTGTTG CGCCCTCACA TCCGCGTGAC GCGCGCCGCC
GATGGCCAAA GCAACTGGAT CCCGTTCGTG GAAACGATCG CGCGAACCAT GAAGCCCGGA
GCCGACAGCC CGGTCTCATT CTCGGAAATC CGGGTCCAGG ATGGCGAACT CAGCTATGAG
GATACCGCCA ACGAGGTTTC CGAGAAACTC GGCGACATCG ACCTGTCGCT GGCCTGGCCC
TCGATCTCCC GCTCGTTCGC CGCGACCGGA CAGTTCGACT GGCGCGGCGA ACGCATCGAC
GGCAGCATCA GCCTCAGCGA TTTTCTTGCC GCGCTGTCCG GCGAACGATC CGGCCTGAAG
GTCAAGGTTG CCAGCGCGCC GCTGAAATTC GCGTTCGACG GCACGGTCGC GAACCCGGTC
AGCCTGATGA TGGAAGGTAC GCTGACCGCC GACAGCACCT CGTTGCGCGA GGCGCTGCGC
TGGATCGGAC AGCCTCCGCC CGGCAGCGGC GGGTTCGGCC GCTTCGCGCT CAAGGCACGC
GCCAGCATGA TCGGCGCATC GATCGCGCTG ACCAACGTCA ACATCGAGAT CGACGGCAAT
GTCGCCGAAG GCGTAATGAC CTACGCCAAC AACGGACGGC AGACCCTGCA GGCGACGCTG
GCAGCCGGCG CGCTCGATTT CACGCCCTAT GTCCAGACTA TCCGTCTGCT CGCCAGCGGC
GCCCGCGACT GGAACAGACA GTTGTTCGAT CTGCATGCGC TGTCCGCAAC CGACCTCGAC
ATGCGGCTTT CGGCGGCGAA GGTTACCGTC GGCTCGACCC GGCTCGGCAA AACCGCACTC
GGCGCCAACC TCCGCAACGG AACGCTGGCG CTCAGCATCG GCGAGGCGCA AATCTATGAC
GGAATCGCCA AAGGATCGTT CGGCATCTCG CGTGCCGACG CGACCGCCGA CGTGAAGGCG
CAGTTTCAGC TCACCGACGT CGATCTGCAA GCCTGCGCCA GCGATCTGTT CGGCACCGGC
AGGCTCTCCG GGCGGGGCAA CCTGAACGTT TCGCTCGAGG CCAAGGGATC GAGCCCGTTC
GGACTGGCGC AATCGCTCGA CGGGACAGCG ACCCTGACCG GGCACGACGG CGCCATCAGC
GGGTTCAACA TCGAGCAACT GCTGAAGCGG CTGGAGCGCC GGCCGCTCTC CGGCGGCGGC
AATTTCCGCA GCGGCAAGAC GCCGTTCGAC ACGCTGAACA TCGCCCTCAG TTTCAACGAC
GGCATCGCAA CCGCGACCGA TGTGCGCGTC GAGGGGCCGG CCGCGCGTCT CATCCTCACC
GGCACAGCCT CGGTGCCGGC GCGCGACTAC GATCTCAAGG GCATCGCAAG CCTGACGCCG
GCGGCGAATG CCGACAATTT CGACCTGCCG TTCGTGATCC AGGGACCGTG GGACGATCCG
CTGATCTTCC CCGATCCGGA AAGCCTGATC CGCCGGTCCA AGGCGTCGGC GCCGCTGCTC
GATGCGGTCA GGGACCGCAA GACCCGCGAC GCGGTCCGCT CGGTGATCGA GCGTCTGTCC
GGTCAGAAAG AGGTTCCCGA AGCGGCCGGT CCAGCCGCCC CGGCAGAGCC CGGAACGTCG
CGCACGAACT GA
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| Protein sequence | MKRLGISVAA ILGVALIGLT GLISMSRLLD RDALRQAVET QISAVTGLDF VADGRIDVSV
FPGSYVSFHD VRIKGSDAGA PALSVDVLTA NLRLLPLLMQ RFQIADIMLL RPHIRVTRAA
DGQSNWIPFV ETIARTMKPG ADSPVSFSEI RVQDGELSYE DTANEVSEKL GDIDLSLAWP
SISRSFAATG QFDWRGERID GSISLSDFLA ALSGERSGLK VKVASAPLKF AFDGTVANPV
SLMMEGTLTA DSTSLREALR WIGQPPPGSG GFGRFALKAR ASMIGASIAL TNVNIEIDGN
VAEGVMTYAN NGRQTLQATL AAGALDFTPY VQTIRLLASG ARDWNRQLFD LHALSATDLD
MRLSAAKVTV GSTRLGKTAL GANLRNGTLA LSIGEAQIYD GIAKGSFGIS RADATADVKA
QFQLTDVDLQ ACASDLFGTG RLSGRGNLNV SLEAKGSSPF GLAQSLDGTA TLTGHDGAIS
GFNIEQLLKR LERRPLSGGG NFRSGKTPFD TLNIALSFND GIATATDVRV EGPAARLILT
GTASVPARDY DLKGIASLTP AANADNFDLP FVIQGPWDDP LIFPDPESLI RRSKASAPLL
DAVRDRKTRD AVRSVIERLS GQKEVPEAAG PAAPAEPGTS RTN
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