| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1240 |
|---|
| Symbol | |
|---|
| ID | 4032234 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1396428 |
|---|
| End bp | 1397531 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637969719 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_576528 |
|---|
| Protein GI | 92116799 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0579] Predicted dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.241084 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGG TTGAGTGCGT AGTCGTCGGC GCAGGCGTGG TCGGACTTGC GATCGCGCGA
CGACTCGCGC GATCCGGCCG TGAGGTCATC GTTCTCGAGG CCGCGGACGC GATCGGAAGG
GCAACGTCGT CGCGCAACAG CGAGGTGATT CACGCCGGCA TCTACTATCC CGCCGGCAGC
CTGATGGCGC GAACGTGCGT CAGTGGCCGG CGCGCACTTT ATGCGTATTG CCGCGAGTAC
GGCATTCCAT ACCGCAATTG CGGCAAGCTG ATCGTCGCGA CGACGGAGCG GGAGGCCGGC
AGGTTGCGGT CCATCAGGGC ACACGCCGAG GCCAATGGCG TCGAAGACAT GCAACTCCTG
AGCGGCGACG ACGCCCGCAC GCTCGAACCG GCGCTGCACT GCGTGGCCGC GCTGCTGTCT
CCATCGACGG GTATTATCGA CAGCCACGCT TTTATGCTGG CATTGCGCGG TGACGCCGAG
CGAGACGCTG CGGCGTTCGC TTTTTACACG CCGCTGTTGC GCGCCAAAAC GACGCCACAC
GGGTTGGAAA TCGAAACCGG CGGCGACACG CCGATGACGC TCGCTTGCGA TCTGCTGATC
AATGCCGCCG GCCTTGGCGC TGCGGCGGTG GCGCGCAGCA TCGAAGGCAT GCCTGTGGAC
CGGATTCCAC CGGCTTACCT CGCCAAGGGA AACTATTTCA GTTGCAGCGC CCGCACGCCG
TTTTCGCGCC TGATCTATCC GGTGCCGGAG CCCGGCGGCC TTGGCGTGCA TCTTACGCTG
GACCTCGCGG GGCAGGCCCG CTTCGGTCCC GACGTGGAAT GGATCGACAC TCCGGACTAT
GATGTCGATC CGGCGCGGGC GACGCGGTTT TACCCGGCGA TCCGGCGCTA CTGGCCCGAA
CTGCCCGATG GCGCCCTGAT CCCGGCCTAT TCCGGAATCC GGCCCAAGAT CGTACCGCCG
GCCGTCGCGC AGCAGGATTT CGTGATCGAG GGGCCCGCCG ACCACGGCGT GGCCGGGCTG
ATCAACTTGT TCGGGATTGA ATCGCCCGGC CTGACGTCGT CACTTGCGAT CGCGGACCAT
GTCGCCGCGC TGGCCGGGAG GTAA
|
|---|
| Protein sequence | MDRVECVVVG AGVVGLAIAR RLARSGREVI VLEAADAIGR ATSSRNSEVI HAGIYYPAGS
LMARTCVSGR RALYAYCREY GIPYRNCGKL IVATTEREAG RLRSIRAHAE ANGVEDMQLL
SGDDARTLEP ALHCVAALLS PSTGIIDSHA FMLALRGDAE RDAAAFAFYT PLLRAKTTPH
GLEIETGGDT PMTLACDLLI NAAGLGAAAV ARSIEGMPVD RIPPAYLAKG NYFSCSARTP
FSRLIYPVPE PGGLGVHLTL DLAGQARFGP DVEWIDTPDY DVDPARATRF YPAIRRYWPE
LPDGALIPAY SGIRPKIVPP AVAQQDFVIE GPADHGVAGL INLFGIESPG LTSSLAIADH
VAALAGR
|
|---|
| |