Gene Nham_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1236 
Symbol 
ID4032230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand- 
Start bp1394289 
End bp1394774 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content68% 
IMG OID637969715 
Productphosphoribosylaminoimidazole carboxylase, catalytic subunit 
Protein accessionYP_576524 
Protein GI92116795 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase 
TIGRFAM ID[TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG TCGCCATCAT CATGGGAAGC CAGTCGGACT GGGAGACCAT GCGTCACGCC 
GCGGAAACGC TGACCGCGCT TGACGTGACG AGCGAGACGC GAATCGTGTC CGCGCACCGA 
ACACCGGAAA GGCTGTTCGC ATTCGCCAGG GGCGCCAAGG CTGAGGGCTT CAAGGTCATC 
ATCGCGGGCG CGGGCGGCGC CGCGCACCTG CCCGGCATGA CGGCGTCGCT GACGGAGCTT 
CCGGTGCTTG GTGTACCCAT CGAATCCAAA GCACTTGCCG GGCTCGACTC GCTGTATTCG 
ATCGTGCAGA TGCCGGCCGG CATTCCGGTG GGAACGCTCG CGATCGGCAA GGCCGGCGCT 
ATCAATGCGG CGCTGCTGGC GGCGAGCGTG CTCGCCCTCA ACGACCCGGC GCTCGCCAGC 
CGCCTCGCGG CATGGCGCAA GCGGCAGACG GATGCGGTGA GCGAACGCCC GGAGGGATCG 
GCGTGA
 
Protein sequence
MTAVAIIMGS QSDWETMRHA AETLTALDVT SETRIVSAHR TPERLFAFAR GAKAEGFKVI 
IAGAGGAAHL PGMTASLTEL PVLGVPIESK ALAGLDSLYS IVQMPAGIPV GTLAIGKAGA 
INAALLAASV LALNDPALAS RLAAWRKRQT DAVSERPEGS A