| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1235 |
|---|
| Symbol | |
|---|
| ID | 4032229 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1393177 |
|---|
| End bp | 1394292 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637969714 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_576523 |
|---|
| Protein GI | 92116794 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGATT CTCGGCGGGT GACGCTTCAG CCGGGCGACA CCATCGGAAT TCTCGGCGGC
GGACAACTCG GCCGGATGCT GGCGTTGGCG GCGGCGCGCC TGGGCCTCAA GTGCCAGGTG
TTCTCGCCAG ATCCGGACTC GCCGGCGTTC GACGTCGTGC AGAACGCCAC CTGTGCCGAA
TACGCCGACG TCGAGGCGCT GGAATTGTTC GCAGCCGACG TCGACGTCGT CACCTATGAA
TTCGAGAATG TCCCGGCGGC GACCGCGATG GTGCTCGCCG CGCGCCGGCC GGTGCTACCC
AACCATCGCA TTCTGGAGAC GGTGCAGGAC CGGCTGGTTG AGAAGAACTT CATCACCGGA
CTCGGTATCG GCACCGCCGC CTATACCGAC GTGGCGTCGG CGGAGGCGTT GCGCGAGGCG
ATCGAAATCA TCGGCCTTCC GGCGGTGATC AAGACCCGCC GCTTCGGCTA CGACGGCAAA
GGTCAGGCCA TCATTCGCGA GGGAGACGAT CCCAGCCAGG TGTGGGACGA TCTCGGCACC
AAGGCGGCGA TCCTGGAAGC CTTCGTAGCG TTCGAGCGCG AGATTTCCGT GATCGTCGCG
CGCAGCGCCG ATGGCGGCGT CGAATGCTTC GACGTGACCG AGAACGAGCA TCGCGATCAC
ATCCTGAAAT ATTCGCGCGT ACCAGCGGCG ATCCCCGATA CGCTCGCCGC TCAGGCGCGC
GACATCGCGC AAAAGATCGC GATCGCGCTC GACTATGTCG GCGTACTGGC CGTCGAGATG
TTCGTGGTGC CGGGCGCCGG CGGGCCGACG CTGCTCGTCA ACGAGATCGC GCCGCGGGTC
CACAACTCCG GGCACTGGAC GCTCGACGGC GCCTCGATTT CGCAATTCGA GCAGCACATC
CGCGCGGTCG CCGGCTGGCC GCTCGGCAAG CCGGTCCGGC ACGGCAGCGC AGTCATGACA
AACCTGATCG GCGACGACAT CCTCGACTAC GGGAAGTGGC TCACCGTGCC GGGCGCAGCC
GTGCATATCT ACGGCAAGGG CGCGCCGCGC CCCGGCCGCA AGATGGGCCA TGTCACCGAG
ATCAAGCATG TCACCGAGGT CAAGGGCCGC GGCTGA
|
|---|
| Protein sequence | MSDSRRVTLQ PGDTIGILGG GQLGRMLALA AARLGLKCQV FSPDPDSPAF DVVQNATCAE
YADVEALELF AADVDVVTYE FENVPAATAM VLAARRPVLP NHRILETVQD RLVEKNFITG
LGIGTAAYTD VASAEALREA IEIIGLPAVI KTRRFGYDGK GQAIIREGDD PSQVWDDLGT
KAAILEAFVA FEREISVIVA RSADGGVECF DVTENEHRDH ILKYSRVPAA IPDTLAAQAR
DIAQKIAIAL DYVGVLAVEM FVVPGAGGPT LLVNEIAPRV HNSGHWTLDG ASISQFEQHI
RAVAGWPLGK PVRHGSAVMT NLIGDDILDY GKWLTVPGAA VHIYGKGAPR PGRKMGHVTE
IKHVTEVKGR G
|
|---|
| |