| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1224 |
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| Symbol | |
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| ID | 4032276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1381920 |
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| End bp | 1383398 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969703 |
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| Product | two component, sigma54 specific, Fis family transcriptional regulator |
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| Protein accession | YP_576512 |
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| Protein GI | 92116783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.138628 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGCCA CCATTTTGAT CGCGGACGAT GACGCAGTGC AGCGCCGACT CGTCGAAAAC
ATGGTGCGGC GGTGCGGCTA TGACGCGATC GTGGTCGAGG GCGGCGATGC CGCCATCGCC
GCACTGACGG CCTCCGACGG CCCCGTCATC GATGCTCTCA TCCTCGACCT CGTGATGCCC
GGCCTCGACG GCATGGGCGT GCTGGCGAAA ATCCGCGAAG CCGGCATCAG CGTCCCCGTC
GTGGTCCAGA CCGCGCACGG CGGCATCGAC AACGTGGTCT CGGCGATGCG TGCCGGCGCG
CATGACTTCG TGATCAAGCC GGTCGGCATC GAACGTCTGC AGGTGTCCTT GCGCAATGCG
CTCAACGCCA GCGCGCTGAA GGGCGAATTG CGGCGCGTCC GCCACAGCCG CGAGGGCCGC
CTCAGCTTCG CCGACATCAT CACGCGCAGC GAGACCATGG CCAACGTGAT GAGGGTCGCG
AGGAAGGCCG CGAGTTCGTC GATCCCGGTC CTGATCGAGG GCGAGTCCGG CGTCGGCAAG
GAGCTGTTCG CGCGCGCCAT CCACGGCACC GGCGAGCGCA GCGCCAAGCC GTTTGTCGCC
GTGAACTGCG GCGCGATCCC GGACAACCTC GTGGAGTCGA TCCTGTTCGG CCACGAGAAG
GGATCGTTCA CCGGCGCAAC CGAACGCCAC ACCGGCAAGT TCGTCGAGGC CTCCGGCGGC
ACCCTGTTTC TCGACGAAGT GAGCGAACTG CCGCTGACCG CACAGGTGAA GCTTCTGCGC
GCGCTGCAGG AAGGTGCGGT GGAAGCGGTC GGCGGCCGCA AGCCGGTCAA GGTCGACGTC
CGCGTTATCT CGGCCACCAA CCGCAGGCTG CTCGATCGCG TCAAGGCGGG ACAGTTCAGG
GAAGACCTGT TCTATCGCCT CCACGTGCTG CCGCTGACGA TCCCGCCGCT GCGAACGCGG
CGCGACGACA TCCCGAACCT GCTGCGGCAC TTCCTCGCGC GCTTCTGCGC CGAGGAAAAC
CGGACGATCA ACGGCATCAG CGGCGAAGCG ATGGCGGGGC TGTCGCAGCT CAACTGGCCG
GGCAACATCC GCCAGCTCGA AAACGCGGTG TACCGCGCGG TCGTCATGAG CGAGGGCGAG
CAGCTTGGCC TCCCGGACTT TCCGCTGATC GGCGCGCAAC CCGCGACAGA CGCCGAGGCG
AACGAGCCAT TGATTATGGA GCCGATGCTC CGGCGACCGT CGCCCGACGT GGTCTCCGGT
AATGAAATAC CCATAGCGCC GCTGCCTGAT GCAGGCAGCC TGGCGATGCT GACTTACGAC
GGTGAAATAC GTCCGCTTGA GGAGCTGGAA GCAGACATCG TTCGCTTCGC GATTTCACAC
TATCGCGGAC AAATGTCCGA GGTGGCGCGT CGGTTGAAAA TCGGGCGGTC CACGCTCTAC
CGCAAACTCG ACGACATCGC CGCGAAGGAG GAACAGTAA
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| Protein sequence | MTATILIADD DAVQRRLVEN MVRRCGYDAI VVEGGDAAIA ALTASDGPVI DALILDLVMP
GLDGMGVLAK IREAGISVPV VVQTAHGGID NVVSAMRAGA HDFVIKPVGI ERLQVSLRNA
LNASALKGEL RRVRHSREGR LSFADIITRS ETMANVMRVA RKAASSSIPV LIEGESGVGK
ELFARAIHGT GERSAKPFVA VNCGAIPDNL VESILFGHEK GSFTGATERH TGKFVEASGG
TLFLDEVSEL PLTAQVKLLR ALQEGAVEAV GGRKPVKVDV RVISATNRRL LDRVKAGQFR
EDLFYRLHVL PLTIPPLRTR RDDIPNLLRH FLARFCAEEN RTINGISGEA MAGLSQLNWP
GNIRQLENAV YRAVVMSEGE QLGLPDFPLI GAQPATDAEA NEPLIMEPML RRPSPDVVSG
NEIPIAPLPD AGSLAMLTYD GEIRPLEELE ADIVRFAISH YRGQMSEVAR RLKIGRSTLY
RKLDDIAAKE EQ
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