Gene Nham_1208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1208 
Symbol 
ID4032299 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1363804 
End bp1364748 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content59% 
IMG OID637969688 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_576497 
Protein GI92116768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTCCA CGACCACAGG AGTTGCCGGC AAAACCCGCG TCCGGATTAG CGCCCTGTCA 
CGTTTCGCCG ACAACGATCG CTGGCTGTGG CGCGCCATGC TGGCACCCGC GATCCTCTAC
ATCGTTCTTC TGGTCGGGTT TCCTTTCCTG CTCTCGCTCT ACTACAGCGT GTCGAGTGTG
ACAGTCGCCA GCCAGGACAT GCATTTTGTA GGTCTGGAAA ATTTCCGGCG CATCGTGGAG
AGCAGCACGT TCTGGCTTTC GCTGCAGAAT ACGATTGTCA TCACAGCCGT TTCTCAGTTC
TTCGTCCTCG TGTTCGCCAA CATTTTGGCG GCGGCGCTTA TTGTTGATTT CCGCGGCAGA
TGGTTGGTGC GGTTTTTGAT CCTGCTGCCG TGGGTGGCGC CGATCTCGCT TGGCAGCATC
GGCTGGCTTT GGATCTTCGA TTCGATCTAT AGCGTCATCA ACTGGACCGC GCGCGCGGTC
GGTCTGCTTG GGCCCAACGA ATGGCCGATC TGGCTTGGCG AACCGACTCT GGCAAGGGCA
TCGATCATCA TCGTCAACGT ATGGCGCATC CTGCCGCTGG CGACCATCAT TATCCTCGCC
GGCCTGTCGT CGATTCCGCG GGATATTCAT GACGCGGCGG AGGTGGATGG CGCTGGCTTC
TGGCGTCACC AATTCCAGAT CACGATGCCG CTGATTCTGC CGATCACGCT GGTGGCGCTG
TTGTTCGGCA TCATCTTTAC GTTCACCGAC ATGATTGTGG TGTTCGTGCT GACGCGCGGA
GGTCCCTACG ACACCACACA GGTTATCGCC AGTTGGGCCT ATTTTACAGG AATTCAAGGT
GGTGATCTGG CGGGAGGAGC GGCCATCTCG CTGTTCCTCT TCCCCGTCCT CGCCGGCGTT
GCAATCCTGT TCCTGTGGTT GGCCGGACGC ACCGAGGTCA CGTAG
 
Protein sequence
MTSTTTGVAG KTRVRISALS RFADNDRWLW RAMLAPAILY IVLLVGFPFL LSLYYSVSSV 
TVASQDMHFV GLENFRRIVE SSTFWLSLQN TIVITAVSQF FVLVFANILA AALIVDFRGR
WLVRFLILLP WVAPISLGSI GWLWIFDSIY SVINWTARAV GLLGPNEWPI WLGEPTLARA
SIIIVNVWRI LPLATIIILA GLSSIPRDIH DAAEVDGAGF WRHQFQITMP LILPITLVAL
LFGIIFTFTD MIVVFVLTRG GPYDTTQVIA SWAYFTGIQG GDLAGGAAIS LFLFPVLAGV
AILFLWLAGR TEVT