| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1194 |
|---|
| Symbol | |
|---|
| ID | 4032285 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1350016 |
|---|
| End bp | 1351173 |
|---|
| Gene Length | 1158 bp |
|---|
| Protein Length | 385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637969677 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_576486 |
|---|
| Protein GI | 92116757 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | [TIGR03588] UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCCT ATGGTCGTCA GGACATCTCT AGCGCCGATG TCGAGGCGGT CGTCGAAGTC
CTTCGGTCAG ACTTCCTAAC CCAAGGGCCG ATGGTCCCCA GGTTTGAGGA GACGTTGGCG
CGGGCAGTCG ATGCGCCTGA AGCGGTAGCC TTTTCCTCGG CGACTGCGGC GCTGCACGTC
GCCTGTCTTG CGCTCGGGCT CGGCCCATCG GATCGACTCT GGACGGTGCC GAACACCTTT
GTGGCATCCG CAAACTGCGG TCTCTACTGC GGAGCGATCG TCGATTTCGT CGATATCAAT
GCCAAGACCC GAAACATGGA TGTCGAGGCA CTAGCCACCA AGCTCGAAGC GGCCGAGCGC
GACGGCACCC TGCCGAAGGT TGTCGTTCCA GTGGACTTCG CCGGTACTTC CGCAGATCTT
GCCTCTATCC GCCGGCTGGC TGACCGATAC GGCTTCCGCA TCCTTGAAGA CGCGAGCCAT
GCCGTTGGCG GATACTACCA GAATCGGCCC GTCGGTTCGA GCGAGCTCGC TGACGTTACC
GTTTTTTCCT TCCATCCCGT CAAGATTGTG ACGACAGGAG AAGGCGGTGG GGCGACCACG
CGTTCTGCCG AGATCGCCCA TCGCATGCGC CTGCTGCGCA ACCATGGCAT TTCGCGCGAT
CCCGCTGATA TGACCGCTGT TCCCGAAGGC CCTTGGTACT ACGAGCAGGT GATGCTCGGC
TTCAACTACC GTATGACCGA CATCCAGGCG GCGCTCGGTG TGAGGCAATT TGATCGCCTC
GCCAAATTCG TTGCCCGGCG GCAGACGATC GCGGCGCGTT ATCACGAAGG GCTTGCTGGT
CTTCCCGTGA TTCGCCAGTT CGTGCCGGAG GGCACTCTCT CGGCGTTGCA TCTATATGTC
ATTGAACTGG ATGAAACCGT GCGGCGTACT CGCGCTGAGG TTTTTGCGGC GATGCGCTCT
TCAGGTATCG GCGTCAACGT CCATTACATC CCGGTCCATC TGCAACCATG GTACCGGGCC
TTGGGATTCG CCCGTGGCGA CTTTCCGGCT TCCGAAAAAT ATTACGACTT CGCGCTGACG
TTGCCTATTC ACCCAAACTT GAGCGCCGAA CAGCAAGATT ACGTTATGGA ACGGTTATCT
CACGCGCTCG AAACTTGA
|
|---|
| Protein sequence | MIPYGRQDIS SADVEAVVEV LRSDFLTQGP MVPRFEETLA RAVDAPEAVA FSSATAALHV
ACLALGLGPS DRLWTVPNTF VASANCGLYC GAIVDFVDIN AKTRNMDVEA LATKLEAAER
DGTLPKVVVP VDFAGTSADL ASIRRLADRY GFRILEDASH AVGGYYQNRP VGSSELADVT
VFSFHPVKIV TTGEGGGATT RSAEIAHRMR LLRNHGISRD PADMTAVPEG PWYYEQVMLG
FNYRMTDIQA ALGVRQFDRL AKFVARRQTI AARYHEGLAG LPVIRQFVPE GTLSALHLYV
IELDETVRRT RAEVFAAMRS SGIGVNVHYI PVHLQPWYRA LGFARGDFPA SEKYYDFALT
LPIHPNLSAE QQDYVMERLS HALET
|
|---|
| |