| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1193 |
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| Symbol | |
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| ID | 4032284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1349018 |
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| End bp | 1350019 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637969676 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_576485 |
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| Protein GI | 92116756 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | [TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.965289 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCAACG GCAAATCCGT ATTTGTTTCC GGTGGTACGG GCTCTTTCGG ACGCAAATTT
GTGAATATAC TACTCGAGCG CTACGACTTG GCGCGCCTCG TTTTCTATTC ACGCGATGAG
CTCAAGCAAT TCGAGATGCA GCAGGAGGTA AACGCGCCCT GTATTCGCTG GCTAATCGGC
GATGTACGTG ACGGTGCGCG TTTGATCGAA GCGACGCGTG GGATTGACTA TCTCGTTCAT
GCTGCCGCTA TGAAGCAGGT GACAGCATCT GAGTATAATC CAATGGAATG TATCCGCACC
AACATTCTTG GCGCGGAGAA CATTGTGGCA GCCGCGCTTG CCAACGACGT TGAGCAGGTG
GTCGCGCTCT CAAGCGATAA AGCGGCTAAT CCGATCAACC TGTATGGCGC CACCAAGCTT
GCATCGGATA AACTGTTCAT TGCTGCTAAC AATATGGCAG GCAAACGACG TACCGCCTTC
TCGGTCGTGC GCTACGGTAA CGTTGCCGGC TCGCGCGGAT CGGTCGTCCC GTTTTTCGAA
AAACTGATAG CGCAAGGCGC GACGTCATTG CCGATTACCG ACACCGATAT GACTCGTTTC
TGGATATCGT TGCAGGAAAG CGTCGACTTC GTTCTGAAGT GCTTCCAACG TATGCATGGC
GGCGAGATCT TTGTACCGAA GTTGCCGTCG ATCCGGATAG TTGACCTTGC AACGGCGATG
GCGCCGCACC TGCCACAGAA CTTGATTGGT ATCCGGCCGG GCGAAAAGCT GCACGAGATA
TTATGCCCTG CGGATAATAG CCATTTGACG CTTGAATTCG GTGATCATTA TGTAATTCGG
CCGTCGATCA AGTTCCACGA TCGCGGTTAT GATTATTCGG AGAACCGTCT CGGTGAGACT
GGTGCTCCTG TAGCGCGGGG TTTCGAGTAC AACTCCGGTA CAAACCCCGT CCTATACTCC
GTGGAACAAA TCCGGGAATT TTATGAGCGG GCCAAGACAT GA
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| Protein sequence | MFNGKSVFVS GGTGSFGRKF VNILLERYDL ARLVFYSRDE LKQFEMQQEV NAPCIRWLIG
DVRDGARLIE ATRGIDYLVH AAAMKQVTAS EYNPMECIRT NILGAENIVA AALANDVEQV
VALSSDKAAN PINLYGATKL ASDKLFIAAN NMAGKRRTAF SVVRYGNVAG SRGSVVPFFE
KLIAQGATSL PITDTDMTRF WISLQESVDF VLKCFQRMHG GEIFVPKLPS IRIVDLATAM
APHLPQNLIG IRPGEKLHEI LCPADNSHLT LEFGDHYVIR PSIKFHDRGY DYSENRLGET
GAPVARGFEY NSGTNPVLYS VEQIREFYER AKT
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