Gene Nham_1139 details

Gene Information

• Locus tag: Nham_1139
• ID: 4032500
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 1290467
• End bp: 1290928
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637969635
• Product: heat shock protein Hsp20
• Protein accession: YP_576445
• Protein GI: 92116716
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0071] Molecular chaperone (small heat shock protein)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTACTT TCGACCTCAC CCCGTTTTAT CGTTCCACCG TCGGCTTCGA TCGCCTCTTC 
AACCTGCTTG ACCAGGCCAA CGGCGATGCG CCGGGCTATC CGCCCTACAA CATCGAACGC 
ACCGGCGAGA ACGCGTATCG TATCAGCGTC GCCGTTTCCG GCTTCGCCCA GGACGAGCTC 
TCCATTGTCG CGAAAGAAAA CACGCTGACG ATCAAGGGCG AAAAGGTCGC CAACGAGAAT 
GGCAAGGACA AGCCCGAGGT GCTGTATCGC GGCATTGCGG CCCGCGCCTT CGAACGCGCC 
TTCCAGCTCG CCGACTTCGT GCAGGTGAAG AGCGCCTCGC TCGAAAACGG CCTGCTCCAC 
GTCGATCTCG TCCGCGAGAT TCCGGAAGCC AAGAAGCCCC GCAGCATTCC AATCGCGGCT 
AGCGCGCCCT CCGCGCCGGT GGTCGAGAGG GCAGCCGCCT GA 

 

Protein sequence

MRTFDLTPFY RSTVGFDRLF NLLDQANGDA PGYPPYNIER TGENAYRISV AVSGFAQDEL 
SIVAKENTLT IKGEKVANEN GKDKPEVLYR GIAARAFERA FQLADFVQVK SASLENGLLH 
VDLVREIPEA KKPRSIPIAA SAPSAPVVER AAA