| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1137 |
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| Symbol | gltD |
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| ID | 4032498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1283549 |
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| End bp | 1285003 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969633 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_576443 |
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| Protein GI | 92116714 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0331749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGA TCACGGGTTT TCTGGAAATC GAGCGGCACG ACCGCAAGTA CGAGCCGGTT
GCGGAGCGTG TGACGAACTT CAAGGAGTTC GTGATTCCGC TTACCGAAAA GGAGACGCGC
GACCAGGCCG CGCGCTGCAT GAACTGCGGC ATCCCCTATT GCCACGGCAC CGGCTCGGTC
GCGCCCGGCG CGCCCGGCTG CCCGGTCAAC AACCAGATCC CGGACTTCAA CGACCTCGTC
TATCAGGGCA ATTGGGAAGA GGCCTCGCGC ACGCTGCACT CCACCAACAA TTTCCCGGAA
TTCACCGGCC GCATCTGCCC TGCCCCGTGC GAAGCGTCCT GCACGCTGAA CATCGACGAC
AACCCCGTCA CCATCAAGAC CATCGAATGC GCGATCGTCG ATCGCGCCTG GGACAACGGC
TGGCTGAAGC CTGAGATCGC GCCGCAAAAG ACCGGCAAGA AGGTCGCCGT GGTCGGATCC
GGACCCGCCG GGCTTGCCTG CGCGCAGCAA CTCGCGCGCG CCGGCCACGA GGTGCACGTC
TACGAGAAGA ACGCCAAGGC CGGCGGCCTG CTGCGCTACG GCATCCCCGA CTTCAAGATG
GAAAAGCACA TCATCGATCG CCGCCTGGCG CAGATGCAGG CCGAAGGCGT CACCTTCCAT
TACGGCAAGA TGATCGGCGG CAGCGCAGCC GATGCGATCG ACCCGGCGCA GCTCGTCAGG
GATTATGACG CCGTGGCTTT GACCGGCGGC GCGGAGGCCT CGCGCGATCT GCCGATCCCC
GGCCGCGATC TCGGCGGCAT TCACTTCGCG ATGGATTTTT TACCGCAGCA GAACCGCCGC
GTCGGCAACG AAAAGGTCGG CGCGCCGGAT ATTCTCGCTA CAGGCAAGCA TGTGGTGGTC
ATCGGCGGCG GCGACACCGG CTCCGACTGC ATCGGCACCT CGTTGCGGCA AGGCGCCAGG
TCGGTGACGC AACTCGAGAT CATGCCGCCG CCACCGGAGC ATGAGAACAA GGCCCTGACC
TGGCCGAACT GGCCCTTGAA AATGCGCACA TCATCGAGCC AGGCCGAGGG CGCCAGGCGC
GACTACGCGG TGCTGACGCA AAAGTTTTCC GGCGCCGACG GCAAGGTGGC CAAGCTGCAC
TGCGTGCGCG TCGACGATAA GTTTCAGTCG GTCGCCGGCA GCGAATTCGA GCTCGACGCC
GATCTTGTGC TTTTGGCGAT GGGATTCGTG CATCCGGTGC ACGAGGGCCT GCTCAAGACG
CTCGGCCTCG ACCTCGACCA GCGCGGCAAT GTCCGCGCCA ATACGCAGGA CTACCGGACC
TCGCTGCCCA AGGTTTTCTC GGCCGGCGAC ATGCGCCGCG GCCAGTCGCT GGTCGTGTGG
GCAATCCGGG AGGGGCGCCT GTGCGCCCGC GCCATCGATC AGACGCTGAT GGGAGCCACC
ACGCTGCCGC GGTGA
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| Protein sequence | MGKITGFLEI ERHDRKYEPV AERVTNFKEF VIPLTEKETR DQAARCMNCG IPYCHGTGSV
APGAPGCPVN NQIPDFNDLV YQGNWEEASR TLHSTNNFPE FTGRICPAPC EASCTLNIDD
NPVTIKTIEC AIVDRAWDNG WLKPEIAPQK TGKKVAVVGS GPAGLACAQQ LARAGHEVHV
YEKNAKAGGL LRYGIPDFKM EKHIIDRRLA QMQAEGVTFH YGKMIGGSAA DAIDPAQLVR
DYDAVALTGG AEASRDLPIP GRDLGGIHFA MDFLPQQNRR VGNEKVGAPD ILATGKHVVV
IGGGDTGSDC IGTSLRQGAR SVTQLEIMPP PPEHENKALT WPNWPLKMRT SSSQAEGARR
DYAVLTQKFS GADGKVAKLH CVRVDDKFQS VAGSEFELDA DLVLLAMGFV HPVHEGLLKT
LGLDLDQRGN VRANTQDYRT SLPKVFSAGD MRRGQSLVVW AIREGRLCAR AIDQTLMGAT
TLPR
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