Gene Nham_1117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1117 
Symbol 
ID4031567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1263065 
End bp1263889 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content60% 
IMG OID637969614 
Producthypothetical protein 
Protein accessionYP_576424 
Protein GI92116695 
COG category 
COG ID 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTAGAC TTCTGCTGGC GGCAGTCATG TGCGGGACAG CGCACGGAGC ATACGCCGCC 
GACATGCCCG ACCTTCCGAT TCTGCGCGGG TCGCTGTCCG ATGGTTTTGG CACGGTCCGG
ACCGTATGGC AGGGCTACTA CGTCGGCGGG CAGGCCGGCG TCGGCGAATC TGACATGAAC
TTCACCGGTG CGACCAGAAA CGTTGCGGCA CGGCTGCTCA GCGGTACGGC CATCGAAAAC
TCAGGGCAGG TCTCGTCCTG GCCGCTGGGA GGCAAGGCTT CGGTACGGGG CGACGGCTGG
GGCGGATTCG TCGGTTACAA CAGCCAGTGG GATGATGTCG TGATCGGTGT CGAAGCCAAC
TATATGCACG GCAAATTTGG CGGCAGCCGA AGCGACTCGA TGTCCCGCTT TTTTACCGAT
TCTCTTGGGT ATACCGATGG CGTGACTTAT CAAAGCACAG CGACCATGTC GATTTCGGAC
ATGGGAACGC TGCGCGCTCG CGCCGGGTAT GTTGTTGGTG CTTTCCTTCC TTATATGTTC
GGCGGCGTAG CGCTCGGCCA AGCCGATATC GTACGCAGCG CGCACATCTT CGGGACACAG
GTTAATCCGG CTGCGGCGCC CGGTTTCACA AACGTGCCCT TTAATGTCAG TGGCACCGAT
GGCAAGTACA GCCATCTGAT CTACGGCTAT TCGGCGGGTG TAGGCCTTGA CGTCAATCTG
ATTGGCGGCC TGTTTGCGCG CGTCGAATGG GAATACATCC GCTTCACCTC CTCGATCGAC
ACAAATGTCA ACACCGTTCG CGCCGGCGTC GGCTACAAGT TCTGA
 
Protein sequence
MRRLLLAAVM CGTAHGAYAA DMPDLPILRG SLSDGFGTVR TVWQGYYVGG QAGVGESDMN 
FTGATRNVAA RLLSGTAIEN SGQVSSWPLG GKASVRGDGW GGFVGYNSQW DDVVIGVEAN
YMHGKFGGSR SDSMSRFFTD SLGYTDGVTY QSTATMSISD MGTLRARAGY VVGAFLPYMF
GGVALGQADI VRSAHIFGTQ VNPAAAPGFT NVPFNVSGTD GKYSHLIYGY SAGVGLDVNL
IGGLFARVEW EYIRFTSSID TNVNTVRAGV GYKF