| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1087 |
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| Symbol | |
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| ID | 4031615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1227442 |
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| End bp | 1229532 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969585 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase, NAD-binding |
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| Protein accession | YP_576395 |
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| Protein GI | 92116666 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAATCCA GGATATTGGA CGTTCTCAAG GATCGCGTGC TGGAGCTCGG GCCGAAACCC
GATGCAAGCG GCCCTTATCG CAACTTCAAG CTGACGCGCG ATGCCGACGG CGTGGCGTGG
GTGCTGTTCG ACCGCGCCGA TTCCAGCGCC AACACGCTGT CGTCGGAGGT GATGGAGGAG
TTCGGCGCGA TCGTGAGCGT GCTGGAAAGC CAGCCGCCCG CCGGCATCGT GATCCGCTCG
GCGAAGCCGT CCGGCTTCAT CGCCGGCGCC GACGTCAACG AGTTCCGCGG TGCCGCCGAT
CCGGAAGAGG TCGAAACGAC GATCGGTCGC GCCCACGGCA TCATCGACCG GCTGGAGGCG
ATGAAGATTC CGAGCGTCGC CGTGATCCAC GGCTTCTGCC TCGGCGGCGG GCTCGAGCTG
GCGCTGGCGT GCCGGACGCG GATCGCCATC GACAATGCGC GGTTCGGTTT CCCGGAAGTG
ATGCTCGGGC TGCATCCCGG ACTCGGCGGC ACCGCGCGGT TCACCAGGCT GGTCAATCCG
ATGCAGGCGA TGACGCTGAT GCTGACCGGC AAGACCATCG ACGCGCGGAA AGCGCGTGCG
CTCGGCCTTG TCGACGCCGT GACCCAGGAG CGCCACGTCC GCAACGCGGT GAAGGATGCG
GTGGCCGGCC GGCTGAAACG CGCCCGGCCT AATGCGCCCA ACTGGCTGCT TAACTTCGGC
CCCGTTCGCG GCTTTCTCGC CTCGCGGATG CGTCGGGAGA CGGAGAAGGC CGCATCGAAG
GAGCATTATC CTGCGCCCTA TGCTTTGATC GACCTTTGGG AGAAGCATGG CGGCAGCAAG
GCCGCGATGC TTGCGGCCGA AAAGCGTTCC TTCGCCGGCC TGATGGTAAC GTCGACGGCG
CAGAACCTGA TCCGGGTGTT CTTCCTGCGC GAGCAGATGA AGAAACTCGC GGGCGGCGGC
AACCTGGTGA AGCACCTGCA CGTCATCGGC GCCGGCGCCA TGGGCGGCGA CATCGCCGCG
TGGTGCGCGC ATCAGGACAT CCGGGTGACG CTCGCGGATA TGAAGCCGGA GCCGATCGCC
GGCGCGATCA AGCGCGCATC CGACCTCTAC GGCAAAATCG TCCGCAAGCG CACCGGGATC
CGCGATGCGC TCGACCGCCT GATGCCCGAT CTCAACGGCG AAGGCGTGCG CAATGCCGAT
CTCATCATCG AGGCGGTGCC CGAAAAGCTC GAATTGAAGC AGAAGGTCTA TGCCGGCCTC
GAGCCGAGGA TGAAGCCGGG CGCGATCCTC GCCACCAACA CTTCGAGCAT TCCGCTGCAG
GAGTTGCGCA CCACGCTGCA GCATCCGGAG CGGCTGGTGG GTTTGCACTT CTTCAATCCA
GTGTCGCGGC TGCAACTGGT TGAGGTGGTC AGCCACGATG CCGCCGACCC GCAGGTGCTG
AAACAGGCCA TGGCGTTCGT CGGCGCCATC GACCGGCTGC CGCTGCCGGT GCAGAGTTCG
TCGGGTTTCC TCGTCAACCG TGCGCTGACG CCGTACATGC TCGAAGCCAT GGTGATGCTC
GACGAGAAGA TCGACAAGAC CGTGATCGAT GCTGCGGCGG AAAAATTCGG CATGCCGATG
GGGCCGATCG AACTCGCCGA CCAGGTTGGG CTGGACATCT GCCTCGCCGT CGGCGACGAG
CTGCGCTCGA AGTTCGGTGA AGCTCTTCCA CAGCCGCCGG ACTGGCTGCG CGAAAAGGTC
GCGAAGGGCG AACTCGGCCG CAAGACCGGC AAGGGTTTTT ACACGTGGCG CGACGGCAAG
GCCGACAAGG GCACCGCGAG CAGGTCGCAG GTCACGCCGG AAATGATCGA CCGCCTGGTG
CTGCCGATGT CGAACGTGTG CGTCGCGTGC CTGCGCGAAG GCATCGTCGA CGATGCCGAC
CTGGTCGACG GTGCGATGAT CTTCGGCACC GGCTACGCGC CGTTCCGCGG CGGCCCGCTG
AACTATGCGC GCACCCGTGG CCCGGAGAAT GTCGCCGCCA ACCTGCGCGA GCTCGCGGAA
AAATTCGGCG TCCGTTTTGC GCCGGACCCC GGCTGGGATG CGTTCAAGTG A
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| Protein sequence | MESRILDVLK DRVLELGPKP DASGPYRNFK LTRDADGVAW VLFDRADSSA NTLSSEVMEE
FGAIVSVLES QPPAGIVIRS AKPSGFIAGA DVNEFRGAAD PEEVETTIGR AHGIIDRLEA
MKIPSVAVIH GFCLGGGLEL ALACRTRIAI DNARFGFPEV MLGLHPGLGG TARFTRLVNP
MQAMTLMLTG KTIDARKARA LGLVDAVTQE RHVRNAVKDA VAGRLKRARP NAPNWLLNFG
PVRGFLASRM RRETEKAASK EHYPAPYALI DLWEKHGGSK AAMLAAEKRS FAGLMVTSTA
QNLIRVFFLR EQMKKLAGGG NLVKHLHVIG AGAMGGDIAA WCAHQDIRVT LADMKPEPIA
GAIKRASDLY GKIVRKRTGI RDALDRLMPD LNGEGVRNAD LIIEAVPEKL ELKQKVYAGL
EPRMKPGAIL ATNTSSIPLQ ELRTTLQHPE RLVGLHFFNP VSRLQLVEVV SHDAADPQVL
KQAMAFVGAI DRLPLPVQSS SGFLVNRALT PYMLEAMVML DEKIDKTVID AAAEKFGMPM
GPIELADQVG LDICLAVGDE LRSKFGEALP QPPDWLREKV AKGELGRKTG KGFYTWRDGK
ADKGTASRSQ VTPEMIDRLV LPMSNVCVAC LREGIVDDAD LVDGAMIFGT GYAPFRGGPL
NYARTRGPEN VAANLRELAE KFGVRFAPDP GWDAFK
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