Gene Nham_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1083 
Symbol 
ID4031611 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp1221208 
End bp1221819 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content63% 
IMG OID637969581 
ProductTetR family transcriptional regulator 
Protein accessionYP_576391 
Protein GI92116662 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.243709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGA TCACAGACAA CACCGAGGCT GATACGCGCC ACCGGATTCT GGTGGTGGCG 
GAGAAACTGT TCCGCGAGAT CGGCTATCAA AAGACCACCG TCGCCGACAT CGCGAAGGTG 
CTGCGGATGT CGCCCGCCAA CGTCTATCGC TTCTTCGACT CGAAGAAGGC GATCCACCAT 
GGCGTGGCAC GGCGGCTGAT GGGCGAGGTC GAGGACGCGG CGCAGGCGAT CGGGGCCGCG 
CCCGGTCCGG CCGCACAGCG GTTGCGGGAA TTGCTGTCGA CGATCCATCA CATGAACAGC 
GAGCGCTATG TCGGCGATTC CAAGCTTCAC GAGATGGTCG CCATTGCCAT GGAAGAAGAC 
TGGGATGTCT GCAAGGCGCA TATGGAGGAT ATCGCCGCGA CTATCGGCGA GGTGATCGCC 
CAGGGCGCGG CGAACGGCGA GTTCGAGGCG CCGGACGTAC CGCTGGCGTC GCTGTGCACA 
TGCACGGCGA TGATGCGTTT CTTCCATCCG CAGATGATCG CGCAATGCGT CGACAAGCCG 
GGGCCGACGC TCGATCAGAT GATCGATTTC GTGCTTGCCG GCCTTGCGCC GCGCGGCGGG 
GGGCGCAAAT AA
 
Protein sequence
MAMITDNTEA DTRHRILVVA EKLFREIGYQ KTTVADIAKV LRMSPANVYR FFDSKKAIHH 
GVARRLMGEV EDAAQAIGAA PGPAAQRLRE LLSTIHHMNS ERYVGDSKLH EMVAIAMEED 
WDVCKAHMED IAATIGEVIA QGAANGEFEA PDVPLASLCT CTAMMRFFHP QMIAQCVDKP 
GPTLDQMIDF VLAGLAPRGG GRK