Gene Nham_1076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1076 
Symbol 
ID4031604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1211183 
End bp1212577 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content66% 
IMG OID637969574 
Producthypothetical protein 
Protein accessionYP_576384 
Protein GI92116655 
COG category[S] Function unknown 
COG ID[COG4949] Uncharacterized membrane-anchored protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.335509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCTGTC GTTTGCACGT CATCGCCACG TCGCTACAAG CCACGACAAC AAGGCAACAC 
ACCGCCGGAG AGGATCGCAT GACCGCGGAA GTCTCGATTG GGGACGGAGA GGCCGCCCGG
CTGACGCCGC ATCCGCTGCG GACCGCGATC CTGGGTGAGC TGCATGCCCG TCCCTTCACG
GCGCTGTCCG TTCCAGCCCG CATCCTGCAT TTCGCGTTCG AGACGGCCGG AGAACGCGCC
CAGGCCGACC GCGCCAATCT CGCCGCATTC TGTTCGGCGC GCGGCCTGCC GGTGCCGACC
TTTGCCGAGC GGCACTATCG CGTCACGTTG GGTACGACCG TGCTGCGATG GGAGCAGCAT
TCCGAATTCA CGACCTATAC CTGGGAGCTG CCCTCCCAAC CTAACGGAAT TCCGTTTCAT
CCGGCAGCCG CGGCGCTCGC TGCCCCGATG CAGCTCGTGC CGCAACCCGG TCCGCTTATT
GTCGCCATCG ATATGCACGT GCTCGCCGAC GGGCCCGCCG TCCAACCGCC GGAGCGGCTG
TTCGATCGCA ACAGTCTCGC GCTTGCCGAA AACAGCGACG GTGCGGCGAT CTACGCCACC
GACTTCCAGC CCGATCCATC CGGCTTCGTG CGAATTCTGA TAGTCGACCG CAAACTCAAT
CCGGATCGCG CCGGCGCGCT GGCGCAACGC GTGATCGAGA TCGAGACCTA TCGCACTTTG
GCTTTGCTCG GCTTGCCGGA AGCGCAGCGG CTCTCGCCTT CGATCAGCGC CGTCGAGCAG
CGGCTCGCGG AAGTGACCGA CAAGATGCGC AACAACGGCA ATCTCGCAGA CAACCGCCAC
CTGCTCGACG AACTGACGGC GCTCGCGGCC GAGGTCGAGG CTGGCGCGGC TGCGAGCGTA
TTCCGCTTCG GCGCCAGCCG CGCTTATTAC GAGATCGTGC AGCAGCGGCT GGCGACCATC
GGCGAACGCA AGGTGTCCGG GCTGCCGACG TGGACGTCGT TCCTGGCGCG GCGAATGGCG
CCGGCGATGC GGACCTGCGT GACCACCGAG GCGCGTCAGG AGAGCCTGTC GTTCAAGCTG
TCGCGCGCAG CGAACCTGCT GCGCACGCGG GTCGACGTCG AACTCGAACA GCAGAATCAG
GAACTGCTGA AATCGATGAA CGCCCGCACG CGGATGCAGC TCCGGCTGCA GACCACGGTC
GAGGGGCTGT CGGTCGCGGC CATCACCTAT TATGTGGTCA GCCTGTTCGG CTATGTCGCC
AAGGCGCTCC ACGAGTCCGG GGCGGTCCCG ATCGAGCCGG GTTATCTGAC CGCGGCCTTT
ATTCCGGTCG CGGCGCTGTC GATCTGGTCG GTCGTGCGCC GCATTCGCCA CAAGCATATC
GGCCGCGACG GCTGA
 
Protein sequence
MSCRLHVIAT SLQATTTRQH TAGEDRMTAE VSIGDGEAAR LTPHPLRTAI LGELHARPFT 
ALSVPARILH FAFETAGERA QADRANLAAF CSARGLPVPT FAERHYRVTL GTTVLRWEQH
SEFTTYTWEL PSQPNGIPFH PAAAALAAPM QLVPQPGPLI VAIDMHVLAD GPAVQPPERL
FDRNSLALAE NSDGAAIYAT DFQPDPSGFV RILIVDRKLN PDRAGALAQR VIEIETYRTL
ALLGLPEAQR LSPSISAVEQ RLAEVTDKMR NNGNLADNRH LLDELTALAA EVEAGAAASV
FRFGASRAYY EIVQQRLATI GERKVSGLPT WTSFLARRMA PAMRTCVTTE ARQESLSFKL
SRAANLLRTR VDVELEQQNQ ELLKSMNART RMQLRLQTTV EGLSVAAITY YVVSLFGYVA
KALHESGAVP IEPGYLTAAF IPVAALSIWS VVRRIRHKHI GRDG