| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1071 |
|---|
| Symbol | |
|---|
| ID | 4031638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 1203366 |
|---|
| End bp | 1204184 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637969569 |
|---|
| Product | formate/nitrite transporter |
|---|
| Protein accession | YP_576379 |
|---|
| Protein GI | 92116650 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2116] Formate/nitrite family of transporters |
|---|
| TIGRFAM ID | [TIGR00790] formate/nitrite transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGATT ATGCGAATGC CGGCGTTGTA ATCGAAACGG TACCGCCGTC GGAGATGGGA
GCGGCGATAG CCGCGGATGC CGCCAAGAAA GCCAAATTCG GCACCATCCA TCTCCTCATT
CGCGGCTTTC TATGCACGCC CTTTCTGGCC TACGGAGCCT GTGTGGTATT TGCCATGGTC
GCCGCTGGCA TACCGCTCGC CGTGGCCGGA CTTGTCTTTC CGGCCGGCTA CGTCACGCTG
AGCTTCCTCG GCCTGGAGAT GGCGACCGGC AGCTTTGCGA CGATGCCCAT CGGTATGTAC
GCCGGCACGA TCACGCCGCT CCAGTTGATT CGCAACTGGG CCTGGACTCT GGGAGGCAAT
CTGATCGGAG GAATATTCTT CGGCTGGCTG CTGTGGTTCT CATTGACCAA GGGTGGGGCC
GTCCCGCCGG ACGGCATGCT CAAAGTCATC GCCCAGACCG CTGAGGCGAA GGTGACCTAT
ATCCATTACG GCGTCATTGG CTGGTGCGCC GCCATTGGCA AGGGCGTCCT TTGTAACTGG
CTGGTGAGCC TGGGGTCCGT CATGTCCAAG GCCACGCGCA GCACCGTGGG CCGGGTGGTG
CTGATGTGGA TCCCCATCGG GATGTTCTTT GCACTGGGCT TCGAGCACAC CGTGGTCAAC
ATGTGGCTGT TCCCGACCGC TATTCTCTCC GGCGCCAACG TCAGCATCTA CGAGTGGTGG
GTCTGGAATC AGATTCCGGT CACCATCGGC AATATCCTGG GTGCGATGGT ACTCAACGGC
ACGCTGTGGT ACTTCACTCA TACTCTGCAG AAGGATTAG
|
|---|
| Protein sequence | MADYANAGVV IETVPPSEMG AAIAADAAKK AKFGTIHLLI RGFLCTPFLA YGACVVFAMV
AAGIPLAVAG LVFPAGYVTL SFLGLEMATG SFATMPIGMY AGTITPLQLI RNWAWTLGGN
LIGGIFFGWL LWFSLTKGGA VPPDGMLKVI AQTAEAKVTY IHYGVIGWCA AIGKGVLCNW
LVSLGSVMSK ATRSTVGRVV LMWIPIGMFF ALGFEHTVVN MWLFPTAILS GANVSIYEWW
VWNQIPVTIG NILGAMVLNG TLWYFTHTLQ KD
|
|---|
| |