Gene Nham_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1070 
Symbol 
ID4031637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1202110 
End bp1202535 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content62% 
IMG OID637969568 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_576378 
Protein GI92116649 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.408045 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGCTC CATCATCAAA GGGTGTGGCC GAAGACGATC TGCGTCTGGT TGCACTCTCG 
CTCATTTCTG AGGCGCCTCG TCATGGTTAC GAGGTCATCC AAACGATCGA GAAAATGACG
GCCGACTGGT TCTTACCCAG CCCCAACGTC GTGCACCCGA TGCTGGCGAG TCTCGTGGAA
GAGCACTGTC TGACCGCATC TGCCGATCCC CCGCGGCTTT TCACCATCAC CGACGAAGGC
CGCGCCTCTC TCGAGCAGAA CCGCGATCGC GCCGATGCCG TCCTCGGCCG ACTGAATGCG
CTCGGCGAAC GCGTCACCCG CTGGCGCAAC GCCCTTGGAA TGGCGGAAAG GTTGAAGGAC
GCCGACGCTG ACGCCACGGA AGGCCTGCTG GATGTCCTCG CCCGCGCGTC TATGCAGAGA
AAATAA
 
Protein sequence
MTAPSSKGVA EDDLRLVALS LISEAPRHGY EVIQTIEKMT ADWFLPSPNV VHPMLASLVE 
EHCLTASADP PRLFTITDEG RASLEQNRDR ADAVLGRLNA LGERVTRWRN ALGMAERLKD
ADADATEGLL DVLARASMQR K