Gene Nham_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1062 
Symbol 
ID4031629 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1191438 
End bp1193789 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content65% 
IMG OID637969560 
Productglycosyl transferase family protein 
Protein accessionYP_576370 
Protein GI92116641 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCG TCATCCGAGC CCGCAAGGAA CCGATCGCCA AGCCGAAGCT GGTCAGCCGA 
CTCGCGCTCT GCGACGACGG CACGGTGTCC GGTTTCGTGT TCGATCCGCA GACTCCGGAA
CGCCACTTTA CGGTCGACAT CCTGCTTGAC GGCCTGGTGC TGAAGACCGC CTACGCCGAT
GCCTTCGTCC CCGAACTCTC CCGGCAAGAC CGGAACGGCG CTTGCGGTTT CGCGGTGACC
ATCGAGCCCG ATCTGCTCCG TGCCGCGCGG CATCTTTCGG CGCGCCTCGC CAATCTCGGG
ACTTCCGTCG GCCACCCCAT CGACCTTGAG AATGACAGCG CAGCCCTGGT CGATCTGCGC
CCGACCTGCA AACTGCGTTG GCTGGGTGGC CTGCACTTCC AGGGCTGGAT CGACAGCGAA
GCCGCCGTCA CCCTGGAAGC GATCGTCGAT GGAGAATCCG TCGCGCAGGT CCGCGCCGTA
GCCTGGGCGC ACATCGGCGG CGATACCGAG GGGGACGCCT CGCGCAACAT TCGCGCCTTC
GATTTTCACG CCCCGCAACG CTTTGCCGAC GGGCGTGTCC ATCGAATCCT GCTGCGGAAA
GAGAATGGCG AACAAATTCC GGCAACGGCT GTCTTCGTTG CATTTCCCGA TGGCCTCGCC
GGAATGATCG ACGTCATCGG CGGTTATGGC GCCGAGCGGT TGCGCGGCAA ACTGTACGAT
CAGCTTATTC CCGCTTCGCT GCCCCTGCAC GACTATGCCG ACTGGCGCGA TCGCTTCCCG
CTGCCGGAGC CGCAGCCAAG CCCGCTTCGG CTGGCCGTCG TGATCGCCGG CAGCGCCGGA
GCCCAACAGA CGCTCTCCAC CCTGGAGACG CAAAGCCACG AGAACTGGAC CGCGGGCGCG
ATCGACGGTC AGCCGCTCCT GATCGACAGC GACGCCCTGC TGGAGTTTCT CGAGAACGCC
GCATCCGATG CGCGGCACGT CGTCGTGACC ATGGCGGGCG TGTCGCTCGA ACGCAACGCC
TTGGCACGCA TCGCCGCCGC ATTCGACGTC CATCCCGACG CGGTGGCGAT ATATGGCGAC
CTCGACTTTC TCGCTGACGA CGGCCGCCTC TGGCCGCTTG CCTTTCCGGC GTTCGATTAC
GAAAGGATGC TCGAGCAAGG GTATTGCGCG CATCTGTTCG CGGTCCGGCG CGACGCCCTG
ATCGCGGCCA TCGAGGCGCG TCCGGACAAC CTCTACCGCC TCTTCAACTG CCTGCTGGAT
CAGGCCGGTC CGCTGCAAGC AGATATCCTC CACTTGCCCG GAGCGTTGGC GACGATGCCG
AAGCTCGACC GGGCAAAAAC CGGCTCCCTG CTGTCCGCCG CGAGCTATCT GCACCTGCGG
GCACGCGGAA TCGATGCGGA CATAACCGAG CAGCAAGGCA ATTTGTTTCC CGCTGTTCGA
ATCAAGCGGC CGTTTTCGCA GCAGCGGGTG ACCGTGATCA TCCCGACGCG CGACCGCGTT
TCTCTCCTGC GCCGATGTCT CGACAGCATC GCACCCGCGG TCGAACGCTG TGGCGCCGAT
ATCCTTGTCG TCGACAACGA CAGCGCCCAT CCGGAGACGA TCGGCTTTCT TGCAGATCTG
CCGCGACGCG GCATCCGGAC ATTGCGGATC GAGGGGCCGT TCAACTTCGC AAGGCTCAAC
AATCAGGCCA TTGCTACGCT CGACAGCGAC ATCCTGTGCC TTCTGAACAA CGACATCGAG
GCAAGCTCCG ATGACTGGCT CGAGGAGATG CTTACGCGCT TGGGCGAACC GGAGGTCGGT
GCGGTCGGCG CGCTGTTGAC CTGGCCTGGC GGCATCATTC AGCACGGCGG GGTGGTGTTG
GGGATGAATT TTTCGGTCGC CCACGCCTTC ACAGACCGAT TCAGCGGTGA CCCGGGCTTT
CTCGATCAAC TCCTCGTGGC GCATGAATGC AGCGCGGTGA CCGCGGCCTG CCTTGCGACC
CGACGAAGCG ACTATCTTGC GGTCGGCGGA ATGGACGAAG CCCGCTTCGC CGTGACATTC
AACGATGTCG ACTATTGCCT CCGCCTGCGC GAGGCCGGCA AGCGCATCGT CCTGACGCCG
CACGCGAAGC TGATCCACGC CGAATCCGCC AGCCGTGGCA GCGACAATCG CGCCAACCGG
CGGGACCGGT TTGAACATGA GCTCAATTTG CTCCGTGCGC GCTGGGGCGA GGTGCTCAAC
GACGACCCGG CCTACAATCC GCAACTGTCG CGCGATGGTG TTCCGTATGG CGGGCTGGCC
TGGCCTCCGG GACCACGGGT CCCTCGGTAC AATCGGCCGC CGCGCGCCGG CGATCTGCCG
TTGGGGTTTT GA
 
Protein sequence
MARVIRARKE PIAKPKLVSR LALCDDGTVS GFVFDPQTPE RHFTVDILLD GLVLKTAYAD 
AFVPELSRQD RNGACGFAVT IEPDLLRAAR HLSARLANLG TSVGHPIDLE NDSAALVDLR
PTCKLRWLGG LHFQGWIDSE AAVTLEAIVD GESVAQVRAV AWAHIGGDTE GDASRNIRAF
DFHAPQRFAD GRVHRILLRK ENGEQIPATA VFVAFPDGLA GMIDVIGGYG AERLRGKLYD
QLIPASLPLH DYADWRDRFP LPEPQPSPLR LAVVIAGSAG AQQTLSTLET QSHENWTAGA
IDGQPLLIDS DALLEFLENA ASDARHVVVT MAGVSLERNA LARIAAAFDV HPDAVAIYGD
LDFLADDGRL WPLAFPAFDY ERMLEQGYCA HLFAVRRDAL IAAIEARPDN LYRLFNCLLD
QAGPLQADIL HLPGALATMP KLDRAKTGSL LSAASYLHLR ARGIDADITE QQGNLFPAVR
IKRPFSQQRV TVIIPTRDRV SLLRRCLDSI APAVERCGAD ILVVDNDSAH PETIGFLADL
PRRGIRTLRI EGPFNFARLN NQAIATLDSD ILCLLNNDIE ASSDDWLEEM LTRLGEPEVG
AVGALLTWPG GIIQHGGVVL GMNFSVAHAF TDRFSGDPGF LDQLLVAHEC SAVTAACLAT
RRSDYLAVGG MDEARFAVTF NDVDYCLRLR EAGKRIVLTP HAKLIHAESA SRGSDNRANR
RDRFEHELNL LRARWGEVLN DDPAYNPQLS RDGVPYGGLA WPPGPRVPRY NRPPRAGDLP
LGF