Gene Nham_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1060 
Symbol 
ID4031627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1189845 
End bp1190399 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content60% 
IMG OID637969558 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_576368 
Protein GI92116639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGTTA TCGAGACCGA ACTCCCTGAA GTCATCATCA TCGAGCCCAG GCTGTTCGGC 
GATCAGCGCG GCTTTTTTCT CGAAACTTAT CAATTTCACC GCTACGCCGA GTACGGCGTC
AGTCGTCCGT TCATCCAGGA CAACCTGTCC CGCTCCGCCC GAGGCGTGCT GCGTGGGCTG
CACCTGCAAA ATCCGCTCAC ACAGGGGAAG CTGGTGACCG CGCTCCGCGG CAAGGTTCTG
GATGTCGCCG TCGACGTGCG CGTGGGCAGT CCGAATTTTG GCCGCCACGT TGCCGTCGAA
CTGAGCGAAG AGAACAGGCG GCAGCTCTGG GTCCCCCGCG GCTTCGCGCA CGGCTTCGTT
GTTCTCTCCG AGACTGCGGA TTTCTTCTAC AAATGCGACG ATCTCTACAG TCCGAAGGAT
GAGCTCTCGA TTCGCTGGGA CGATCCCGCG ATCGGTATCG ACTGGGGCCT GGAGACACCG
TTCTTGTCGG CCAAGGACGC CGGCGCGCCG CTGCTCGCCG ACGTAAAAAA CCTTCCGGTC
TATGGGCAGA TCTGA
 
Protein sequence
MNVIETELPE VIIIEPRLFG DQRGFFLETY QFHRYAEYGV SRPFIQDNLS RSARGVLRGL 
HLQNPLTQGK LVTALRGKVL DVAVDVRVGS PNFGRHVAVE LSEENRRQLW VPRGFAHGFV
VLSETADFFY KCDDLYSPKD ELSIRWDDPA IGIDWGLETP FLSAKDAGAP LLADVKNLPV
YGQI