Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1060 |
Symbol | |
ID | 4031627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1189845 |
End bp | 1190399 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637969558 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_576368 |
Protein GI | 92116639 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGTTA TCGAGACCGA ACTCCCTGAA GTCATCATCA TCGAGCCCAG GCTGTTCGGC GATCAGCGCG GCTTTTTTCT CGAAACTTAT CAATTTCACC GCTACGCCGA GTACGGCGTC AGTCGTCCGT TCATCCAGGA CAACCTGTCC CGCTCCGCCC GAGGCGTGCT GCGTGGGCTG CACCTGCAAA ATCCGCTCAC ACAGGGGAAG CTGGTGACCG CGCTCCGCGG CAAGGTTCTG GATGTCGCCG TCGACGTGCG CGTGGGCAGT CCGAATTTTG GCCGCCACGT TGCCGTCGAA CTGAGCGAAG AGAACAGGCG GCAGCTCTGG GTCCCCCGCG GCTTCGCGCA CGGCTTCGTT GTTCTCTCCG AGACTGCGGA TTTCTTCTAC AAATGCGACG ATCTCTACAG TCCGAAGGAT GAGCTCTCGA TTCGCTGGGA CGATCCCGCG ATCGGTATCG ACTGGGGCCT GGAGACACCG TTCTTGTCGG CCAAGGACGC CGGCGCGCCG CTGCTCGCCG ACGTAAAAAA CCTTCCGGTC TATGGGCAGA TCTGA
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Protein sequence | MNVIETELPE VIIIEPRLFG DQRGFFLETY QFHRYAEYGV SRPFIQDNLS RSARGVLRGL HLQNPLTQGK LVTALRGKVL DVAVDVRVGS PNFGRHVAVE LSEENRRQLW VPRGFAHGFV VLSETADFFY KCDDLYSPKD ELSIRWDDPA IGIDWGLETP FLSAKDAGAP LLADVKNLPV YGQI
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