Gene Nham_1056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1056 
Symbol 
ID4031623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1184942 
End bp1186192 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content55% 
IMG OID637969554 
Producthypothetical protein 
Protein accessionYP_576364 
Protein GI92116635 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.496515 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACACGG AAACTGCGAC ACTGACAAGA TTCGGCTTGG ACCTGGATAT CGACGCGCTC 
TCGGTAAACG AGATCGAGCG AAGATTGAGA GAGTTTTTTT CCAGCCGGAT CGCCAATCCG
AATCCGGAAG ACCTGATGCA GTCGGTCAGG GAGCTGGAAG AGCAGTTCAG CGGTTTCAGC
GAATATCAAT TCGCGAAGGC CGCGGTTCTC GTGCAGGCGT GTGATTTTGC GCGAGCCCGG
GAAATTCTGA CCCGCCTTGC CAGGGAGCTG CCTTCCGATT CTCGTATCCT GCATCGACTT
GCGGTAACGC ATTTGAACAT GGGGTCTGCC CAGGCGGCGC AAGACACCTA TCTTGCCGCC
CTGGCTCTGG CTCCGCAGAG CGAGAATCTT CGCCGGGAAC TCGCCGGCCT CCTGCGAGTC
ATGGATGCCA GAAAACTGCA TGCCGGAGTG AGACGCAAGA AGCACGGATT GTCTGTTGTG
TGTGCGATGA AGAACGAAGC GGACGATCTG CTTGAGTGGC TGCACTTTCA CAAGCTGGCT
GGTGTCGACC ACTTTTATTT GTACGACAAT GAAAGCACCG ACGGGACACG AACGATCATA
GAATCGTTTC CCTGGCCGGA CATGATCACG TACCACTACG TGGAGGGCGA CTTCGGTCAA
ATACGCGCAT TTCATCACGC GATCGACAGC TATCGAAACA GCTCCGAATG GTGCGCTTTC
ATCGATGCCG ACGAGTTTCT CTATCCCGTC GAGGGCGGCA GCATCAAAGA TGTTCTGGAA
GAGGTTTCAT CGGCGCCGGC CGTTGCGGTT CACTGGCTGA ATTTCGGATC CAACGGTCAC
GACGCGAGAC CGCAAGGTCT CAGCATCGAG TCGTTCACGC GACGGGCGCC TGATGATTTT
CCGGATCACT ATGTGATGAA ATCAATTGTA CGTCCTGATG CGATCGTGGC CTATCTCCAT
CCTCACCAGT CTCTTGTGTT AGGATGTTAT GTCCAGGAAG ATGGTACCCA GGTTTTCCCG
ATCGGCGGGC GATGCTCGGT TCCAAAGCGC CGGAAGCTGG CGATCAATCA TTACTATACA
AAGTCTCGGC AGCAGCTTTT GAAGAAGCGG GAGCGGGGAA GGCCTTTAGG GGAAGGTGAC
CCCGAGCGCA TACGCGCGAT GGAATTCTTT ACGCTTCGAG ACCGGAATGA TGTCGAGGAT
TTAACGATCC TGAAATTCCT GCCCGAGCTT AAGAGGCTCG TTCATCTCTG A
 
Protein sequence
MDTETATLTR FGLDLDIDAL SVNEIERRLR EFFSSRIANP NPEDLMQSVR ELEEQFSGFS 
EYQFAKAAVL VQACDFARAR EILTRLAREL PSDSRILHRL AVTHLNMGSA QAAQDTYLAA
LALAPQSENL RRELAGLLRV MDARKLHAGV RRKKHGLSVV CAMKNEADDL LEWLHFHKLA
GVDHFYLYDN ESTDGTRTII ESFPWPDMIT YHYVEGDFGQ IRAFHHAIDS YRNSSEWCAF
IDADEFLYPV EGGSIKDVLE EVSSAPAVAV HWLNFGSNGH DARPQGLSIE SFTRRAPDDF
PDHYVMKSIV RPDAIVAYLH PHQSLVLGCY VQEDGTQVFP IGGRCSVPKR RKLAINHYYT
KSRQQLLKKR ERGRPLGEGD PERIRAMEFF TLRDRNDVED LTILKFLPEL KRLVHL