Gene Nham_1055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1055 
Symbol 
ID4031622 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1183745 
End bp1184668 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content53% 
IMG OID637969553 
Productglycosyl transferase family protein 
Protein accessionYP_576363 
Protein GI92116634 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0151578 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGCCA GCGTCGTGAT CGCTTGCTAT AGGCATGAAT CGTACATCGA AGAGTGCCTG 
GAGACTGTTT ATCGACAGAC CTTTCCGGAT ATCGAGCTCG TTGTCATCGA CGATCATTCG
CCTGACAAGA GTTTTGAAGT CGCGCAGCGG CTCACCAAAA AGAAGTCTTT TAGCAAACGG
TTCGTGTCTT GCACGCTCCT GAGAAACCCT CTCAATCTTG GAGCACACTG CACCTGGAAC
AGGGCGTTGT CCCTTGCAAA GGGAGACTTG ATCTTCTTCC TGAACTCCGA CGATGCCTTT
TCAAAGGATC GCATTCGGAT ATTCGCCAGC CAATATGACA ATGAGAAACT GTTTTTTGGC
TTTTCGGCCG TCGAACCGAT CGATGAACGC GGCAGGCCGA TAACGACTCA CCAATTTCCA
ACGAGCCTTC GATACGCCAT CGATCGGGCC CGGATAACCG GCTCTCCACT ATCCTGGTCA
TTTCTGGATT CGCAGATCGC CGCCTCTACC GGCAATTTCG TGTTGAGCCG GGAATTGCTG
CGGAAGATCG GACTGCTGTC CGACCTGAAA TACTGCCACG ACTGGGAGTT CGCGCTACGC
GCCATAACCG TGGTCGAGCC CAGATACGTG GAATCGGATC GCTATATGTA TCGGCTTCAT
TCGACGAACA GCTTTCGAAG CCTGAGCAAC GTGGCCGAAA GCGAGACCAG GGCCTGCATG
TCGTCATACT GCATGAACGC GATAGCCCAA CGGCCGATCA ACAGAGCTTG CCTCAGTCCC
ATAAACTTCG GAGATGCATT CTACAAGTTC ATCAAGCTTC ATCCGAACTT CAACTATTGG
GCGAAGCAAT TGTATGCTCC CTATCAGCCC GATCATCGGA CCGTGGACTG GAATGAATGG
ACGATGCCGC CCGACTGGCG ATAA
 
Protein sequence
MLASVVIACY RHESYIEECL ETVYRQTFPD IELVVIDDHS PDKSFEVAQR LTKKKSFSKR 
FVSCTLLRNP LNLGAHCTWN RALSLAKGDL IFFLNSDDAF SKDRIRIFAS QYDNEKLFFG
FSAVEPIDER GRPITTHQFP TSLRYAIDRA RITGSPLSWS FLDSQIAAST GNFVLSRELL
RKIGLLSDLK YCHDWEFALR AITVVEPRYV ESDRYMYRLH STNSFRSLSN VAESETRACM
SSYCMNAIAQ RPINRACLSP INFGDAFYKF IKLHPNFNYW AKQLYAPYQP DHRTVDWNEW
TMPPDWR