Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1053 |
Symbol | |
ID | 4031659 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1179297 |
End bp | 1181336 |
Gene Length | 2040 bp |
Protein Length | 679 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637969551 |
Product | Sel1-like |
Protein accession | YP_576361 |
Protein GI | 92116632 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTTCAT CGCGATCGCT TTTCGAGTGG TTTCGACCGG CTTCCGCATC ATCCCGCGCT GCCCCTCTGG CGCATGGAAT GGCTGCATAC GAGCGCCGTC AGTATCTGGA GGCGATCAAG CTCTGGAAGC TCGCGTCAGA GGCTGGCGAG GCCGAAGCGG GCTATCGAAT AGGAATGCTC TATGTGAGAG GCGAGGGGGT CGTCAGAAGC GTGCCCGATG CCGTCGTCTG GTATGAGTGG GCGGCCCGAC TCGGCAACGT CGAAGCCATG TTCCAACTCG GCTTGATCTT TCTACATGGA GACAAGCCGC TGCTCGGTCC CTGTCGCCAC GAAACGTGGC GCCAGTCCTC CGCCGTTCGG CTCGGCGACA AAGCGTCAAC TATTCACCAG CTCGTGTTTC CGCATGGAAC AAGCGTTGAG CGGAATGTCG ACGCTGCTTT CGGTTGGATA GCGGTCGCGG CGGAAAGAGG CAAAGCAGAA GCACAGACGG TCCTTGGCAA CATGTACTGC GAGGGAGTCG GCTGCGAGAA GGATTTCCGT GCGGCGCTCG CATGGTATCG GGCCGCGGCC GACCAGAACT GCGCCGCAGC CGAATTCGCG CTTGGCGACG TCCATTATCA AGGCAAAGGC GTTCCCGTTG ATTTCGAGCA GGCGGCGGTC TGGTACCGCA AGGCGGCCGA ACAGGATCAT GTCAGGGCGC AGGTTGCGCT TGCGTTCATG AACCTGAAAG GAACGGGCCT GCCGGAGGAC CCCGCTGAAG CCGCTCGCCT GTTCCAGGGT GCCGCCAGGC AAGACGATAC GATCGCGCTC TACAACATCG GCCTGTTGCG CTTGAACGGC CATGGCGTTG CGAAGGATAT CGACCGGGCC GAAACCGCAC TGCGCAAGGC GGCGCGCAAG GACTACTTTC CGGCAGTCCA GGCGCTGGCG GATTTTTATT CGCACGGCGC AGGCTCCGAG CCCGATTTGC GGGAGGCCGC GGTCTGGTAC GAGAAGGCCG CCGAGCGGGA CGATGTGCAG GCGCAGTTTT TCATGGGCCG CTTCTATGCG ACGGGCACCG GCGTCGGTCC GAATATCCGT CAAGCCGCAA AATGGTTCGA GCGCGCGGCC GGGAATGGTC ATGCGACCGC CGCGTTCAAC ATCGCCATCT TCTATCTCAA TGGCTCCGGC GTCGAACGCA ATGTGGAAGC CGCAATCGAA TGGTTCGAGC GCGCATCCGA AAGCGGCATC CGCGCCGCGC AGTTGCAACT CGGGAGGCTT TATTCGGCGG GCAATGGGGT TCCGCGAGAT CACAAGCGGG CGGGAGAATG GCTCAGCAAG GCCGCTTCGG GCGGAGAGCC GGACGCCAAG ACGGCCTATG CGTTTTTCCT GCTTCACCAC GACGATTCGA CCGAGCGGCT TGAACAGGTG CGATCACTGT TGAGCGAGGC GGCTGAAGCC GGCCACGCGC CGGCTGCATT CCAGCTCGGT GTGTTGGAAA TGGGCAGGTT TGGCGGGAGC GTGGATGTCG AAGCTGCCGT GTCGTGGTTC TCCCGTGCCG CCGGCGCAGG TCATGTCGAG GGCCAATACA CTTTGGCGCT TCTGTATCTC GATCCGAACA ACGCCGTGAG CGATGCGAAG GCAGCGGTAT CCTGGATGAC CAGAGCCGCC CATGCAGGCC ATGCTGGCGC GCAGTTTCAG CTCGCCGTGA TCTATTGCAC CGGCGCAGGC GTAGCCCAGG ATGTCGCGCA GGGCGCGAAC TGGTACGAGG CTGCCGCGCG ACAGGGGCAT AAGGTAGCGC AGTTCAACCT CGCGGTGATG CTTGGAAAAG GACAGGGCTG CGAGGCCGAT CCCGGGAAGG CGGTCGAATG GTTCGAGAAA GCGGCTGAGC AGGATATGGC GGAAGCGCAG GTTGCGCTCG GCGATGCGTT GATGTCGGGA AGCGGCGTTG CGCAAGACCG GGACGCGGCG GTGCACTGGT ATCAGCAGGC CGCGCGGCAA AACCACGAAG GGGCGGTGCG CCGTCTGGAT GCGATCGGCG TGACGCTGGT CGATGGTTGA
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Protein sequence | MLSSRSLFEW FRPASASSRA APLAHGMAAY ERRQYLEAIK LWKLASEAGE AEAGYRIGML YVRGEGVVRS VPDAVVWYEW AARLGNVEAM FQLGLIFLHG DKPLLGPCRH ETWRQSSAVR LGDKASTIHQ LVFPHGTSVE RNVDAAFGWI AVAAERGKAE AQTVLGNMYC EGVGCEKDFR AALAWYRAAA DQNCAAAEFA LGDVHYQGKG VPVDFEQAAV WYRKAAEQDH VRAQVALAFM NLKGTGLPED PAEAARLFQG AARQDDTIAL YNIGLLRLNG HGVAKDIDRA ETALRKAARK DYFPAVQALA DFYSHGAGSE PDLREAAVWY EKAAERDDVQ AQFFMGRFYA TGTGVGPNIR QAAKWFERAA GNGHATAAFN IAIFYLNGSG VERNVEAAIE WFERASESGI RAAQLQLGRL YSAGNGVPRD HKRAGEWLSK AASGGEPDAK TAYAFFLLHH DDSTERLEQV RSLLSEAAEA GHAPAAFQLG VLEMGRFGGS VDVEAAVSWF SRAAGAGHVE GQYTLALLYL DPNNAVSDAK AAVSWMTRAA HAGHAGAQFQ LAVIYCTGAG VAQDVAQGAN WYEAAARQGH KVAQFNLAVM LGKGQGCEAD PGKAVEWFEK AAEQDMAEAQ VALGDALMSG SGVAQDRDAA VHWYQQAARQ NHEGAVRRLD AIGVTLVDG
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