| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1051 |
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| Symbol | |
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| ID | 4031657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1175724 |
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| End bp | 1177958 |
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| Gene Length | 2235 bp |
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| Protein Length | 744 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637969549 |
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| Product | ABC transporter related |
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| Protein accession | YP_576359 |
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| Protein GI | 92116630 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGCGC AAGCCGTCGC CGAGAATGCC GATGTTGATC CGATTCATCC GTCCGGGCTC
GAATGTCTGG TCATTGTCGC ACGACCGCAC GGGTTGGATC TCACCGCGAC GCAGCTTATC
AAGGATAACC TTCTTACCGA CCGGGAAGTG GCTCCCGGCC AGCTCGTCCG CTGCGCCGAG
AAGGCCGGTC TGCGATCGAA GCACGTTAAG CTCGATTGGG ACGGGCTTTC TCATCTGAAA
AAGGCGCTCC CGGCCATCGT CGGCCTGCGC GATGGAAGCT ACATGGTGTT GCTGCGCGTC
GATGGAGACG CCAACAATAC CCGTATCGCG TTGAGAGACC CGAACGCGGC GGAAGACGCG
CTGCTCGTGA TCGATCAACC GCGCTTCGAA GATATCTGGT CCGGGGACGT CGTTCTCGCC
AAGCGCAACT ACGAAATCTC GGACGAATCG CAGCCGTTCA GTTTTGGTCT CGTGGCCGCA
TTGATATTCC GCGAGCGTCG CATCGTCCGG GACGTCGCAA TCGCTGCGCT GGTTCTCGGA
TTCCTCGGCC TTGCGCCTAT CATGTTCTGG CGCCTGCTGT CGGACAAGGT GATCTTCTAT
CACGCGTACA ATACCTTCTA CGTGCTCTGC CTGGCGATGC TGGTCATCAT CGCTTTCGAG
GCGACATTCG CGTTTCTCAG GCAAATCCTT GTTCATCGCC TGACGACCAG GCTTGACGTC
AAGCTGTCCA CTTACGTTTT CGAAAAGGTC CTCAACCTTC CTATCGATTA TTTCGAGCAG
ACCGCCGTCG GCCTCGTCGC GCGCGACATC CGGGAAGTGT TCCGCATCCG CTCGTTCCTG
ATGGGTCAGT TGTTCGGTAC GGTGCTCGAT TCAACGACGC TGATCTTCTT CCTACCGGTC
ATGTTTTTCT TCAGCCCGAC CATGACTTTG GTGGTTTTGG CGCTGTCGGC GATGATCGTC
GGGTGGCTTA TCCTGATGCT GCCGGCTTAC CGCAAGTCGT CGAACGCCGT GCTGGTCGCG
GAAGGCGAGC AGGGCGCGTT CCTGGTTCAA ACGCTCAACG GCATTCGGAC GGTAAAATCG
CTGGCGCTCG ATGCGCGGCA GCGCCATTTG TGGGATGTGC TCGTTGCACG TGTCGCCAGG
GCGCGGTTCG CGGAAGGGAT GACCGGAAAC GCGATCCAGG CGGTGGTGCG TCCGCTGGAG
CGGCTGGCGG TGAGCGGTTC TTATGCGGTC GGCGTTTATC TCGCGCTGAC CAACGATGAC
CCGGTCTTTA TCGGGGCGTT GTTTGCCTTC CTGATGCTGT CGCAGCGGGT ATCGGCCCCG
TTGATGCAGA TGGCCCAGCT GATCAATCAA TACGATGAAG CGCGTAGTGC GGTCGCCACG
GTCCGCAACC TCGTGAACCA GCCCGCCGAG GAGGGGCGTT CCGGGCATGG CGTTCGCTCG
CCGATCGAGG GCAGAGTGGA GTTTTCCAAT GTCACCTTCA GGTATAAAGG CGCCGTCTCG
CCAACGCTGA ACGGCATTTC CTTTGAAGTA ACCAGGGGAA CCACGCTTGG TGTGATGGGC
AAGAGTGGTT CCGGCAAGAC CACGATCACG CGACTCTTGC AGCGATTGCA TTCCGATTAT
GACGGGTTGA TCAAGATCGA CGGAGTCGAC GTTCGCGAAT ACGATGTCGA TCACCTGCGC
AGGAACGTCG GCATCGTGCT GCAGGAAAAT TTTCTCTTTA GTGGGACGAT TCGCGAGAAC
ATCTGCGCAG CCGTGCCGGA CGCCACCTTT GACGATATCG TCAAGGCGGC GCGAATGGCG
GGCGCAGAGG AGTTCATCGA CAAGCTGCCA CGCGGTTACG AAACCCGTGT CTATGAAGGA
TCGCCCAACC TTTCCGGAGG GCAGCGGCAA CGGCTCGCTA TTGCGCGGGC GTTGATCGTC
GATCCGCCGA TCCTCATTCT CGACGAGGCG ACCAGCGCAC TTGACGCCGA TAGCGAGGCC
ATCGTGAACG GCAACATCGC GCGGATAGCA AATGGCCGAA CGCTGATCAT TATCTCCCAC
CGGCTGTCGT CGCTGACGAG GGCGGATGCG ATCCTCGTAC TCGACCGCGG GGCGGTCGAC
GACATCGGGC GACACGAGGA GTTGCTGGAG CGGAACGATA TCTACAGTTC GCTTTGGTAC
CAGCAGAACA CGCATCTCGC GCCCGCGGTC CGCAGCGACA AGCCGAAACT CCGGAGCCCG
ACCCTTGTCC CCTAG
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| Protein sequence | MIAQAVAENA DVDPIHPSGL ECLVIVARPH GLDLTATQLI KDNLLTDREV APGQLVRCAE
KAGLRSKHVK LDWDGLSHLK KALPAIVGLR DGSYMVLLRV DGDANNTRIA LRDPNAAEDA
LLVIDQPRFE DIWSGDVVLA KRNYEISDES QPFSFGLVAA LIFRERRIVR DVAIAALVLG
FLGLAPIMFW RLLSDKVIFY HAYNTFYVLC LAMLVIIAFE ATFAFLRQIL VHRLTTRLDV
KLSTYVFEKV LNLPIDYFEQ TAVGLVARDI REVFRIRSFL MGQLFGTVLD STTLIFFLPV
MFFFSPTMTL VVLALSAMIV GWLILMLPAY RKSSNAVLVA EGEQGAFLVQ TLNGIRTVKS
LALDARQRHL WDVLVARVAR ARFAEGMTGN AIQAVVRPLE RLAVSGSYAV GVYLALTNDD
PVFIGALFAF LMLSQRVSAP LMQMAQLINQ YDEARSAVAT VRNLVNQPAE EGRSGHGVRS
PIEGRVEFSN VTFRYKGAVS PTLNGISFEV TRGTTLGVMG KSGSGKTTIT RLLQRLHSDY
DGLIKIDGVD VREYDVDHLR RNVGIVLQEN FLFSGTIREN ICAAVPDATF DDIVKAARMA
GAEEFIDKLP RGYETRVYEG SPNLSGGQRQ RLAIARALIV DPPILILDEA TSALDADSEA
IVNGNIARIA NGRTLIIISH RLSSLTRADA ILVLDRGAVD DIGRHEELLE RNDIYSSLWY
QQNTHLAPAV RSDKPKLRSP TLVP
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