Gene Nham_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1050 
Symbol 
ID4031656 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp1174800 
End bp1175426 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content58% 
IMG OID637969548 
Producthypothetical protein 
Protein accessionYP_576358 
Protein GI92116629 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCCCCG GTATCAAGCA CTTGCTTAAT GCGGGCTCCG GACCCGGATC CGCGCGACGA 
ATTGCTCGAA TGGTACATGA GCAAGACCTG AAAGAGGTGC GCTTTGACAT CGATCCCGGT 
GTCGAACCCG ATGTCGTGGG CTCGATCCTC GAAATCGAGA CGTCCTTCGA GCCGCAGTCC 
TTCGATGTGA TATGGTCGTC GCACGTGCTT GAGCATCTCT ATGCTCACGA GATCTTTCCC 
ACGCTGCGCC AGTTCCATCG GATCCTGAAG CTGGACGGAT TCGCTTTGAT CATGAGCCCG 
GATCTCGAAG CCGTAGCTCA TTTTATCGTC GAGCAAGGTA TTGCGGCCGT CGCCTATAAT 
TCTCCGGCAG GCCCGATCAG GCCGCTCGAT ATGCTTTACG GCCATTCCCG CGCGATCGAG 
GAAGGGCACG TGCATATGGC CCATCGCACC GGATTTACGG CCGAGCGGCT CGGCAATCTG 
CTGTTGATGG CGGGCTTCCC CACTGTGTCG GTGGCGACGG AGAACTTCGA GGTCTGCGCG 
CTGGCGCTGA TGCCCGAGGC CGATGATGCG GCCATCAAGA AGGCTTTGTT AGAAAGCGGC 
TTTAATTTTC AGGAAGCACT GACATAA
 
Protein sequence
MPPGIKHLLN AGSGPGSARR IARMVHEQDL KEVRFDIDPG VEPDVVGSIL EIETSFEPQS 
FDVIWSSHVL EHLYAHEIFP TLRQFHRILK LDGFALIMSP DLEAVAHFIV EQGIAAVAYN 
SPAGPIRPLD MLYGHSRAIE EGHVHMAHRT GFTAERLGNL LLMAGFPTVS VATENFEVCA 
LALMPEADDA AIKKALLESG FNFQEALT