| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1031 |
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| Symbol | |
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| ID | 4032374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 1153137 |
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| End bp | 1154009 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969529 |
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| Product | PDZ/DHR/GLGF |
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| Protein accession | YP_576339 |
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| Protein GI | 92116610 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGTT TCGATCTTGG TGCTTTTTCC GACGCGGTCG CCGGCATTGC CGAACAGGCC
GCACCGACCA CCGCCAGTTT CGTGACCCAG CATGGCCGCA CCGCAACGGC CTTTCATTGG
GGCGATGGAT TCTATGTCGC CGCCGAGGAG GCTGTCGAGC CGGACGAGGA TCTGCGGCTC
TCGCTCGCTT CCGGGGAGAC CGTCACGACA AAACTGGTCG GTCGCGATCC ATCGACCGGC
ATCGCACTGT TTAACTCGGC GACTGCTGCC GTCGCGCCTG TCCTTGAGAA AGCCGGTCCG
GTACGGCCCG GCCACCTCAT CGTCGTAGCG GGGCGTGAGG GGGCTTCGTC GCTCGCTGTG
CTCGGAACCG TGGGCGAGGT CGGGCCGGCG TGGCGCTCGC TGCGCGGCGG CACCATCGAT
CGTCGGATCA ATCTGGCGGT GATGACGGGG GGGCGCTTCG AGGGCGGACC GGTGCTGGAC
GCCCGGGGCG GACTGGTCGG GATGTTGCTG TTTGGTCCGC GCAGGCGGGC GCTGGTCATC
CCCTTTGAGA CGATTGAGCG CACGGTCGCG ACGTTAAGGA GCAAGGGCCA TGTCGTGCGC
GGCTATCTTG GCGCCGGGCT GCACCCGATC CATCACACCG ATGTACAGGG CGCCATCGTT
GTCGGCCTCG ATGAAGAAGG ACCGGCGAAG GCGGCCGGTA TTGTGCTGGG CGACATCGTC
GTCAGTTGGA ACGGCGAGAA GGTGCGCGGA CCACGCGAAT TGATCCGCAG ACTGGGACCG
GACAGTGCAA GCGCTGCGGT CACGCTTGGC GTATTGCGTG GCGGCGAGGC GCGCGATGTG
ACGGTTACCA TTGGCGAGAA GCCATTGAGC TGA
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| Protein sequence | MSSFDLGAFS DAVAGIAEQA APTTASFVTQ HGRTATAFHW GDGFYVAAEE AVEPDEDLRL
SLASGETVTT KLVGRDPSTG IALFNSATAA VAPVLEKAGP VRPGHLIVVA GREGASSLAV
LGTVGEVGPA WRSLRGGTID RRINLAVMTG GRFEGGPVLD ARGGLVGMLL FGPRRRALVI
PFETIERTVA TLRSKGHVVR GYLGAGLHPI HHTDVQGAIV VGLDEEGPAK AAGIVLGDIV
VSWNGEKVRG PRELIRRLGP DSASAAVTLG VLRGGEARDV TVTIGEKPLS
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