Gene Nham_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1029 
Symbol 
ID4032372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1150399 
End bp1151913 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content60% 
IMG OID637969527 
ProductCHAD 
Protein accessionYP_576337 
Protein GI92116608 
COG category[S] Function unknown 
COG ID[COG3025] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.739933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGTTGA GGCTGCTTGC ATCGCGAGGA GCCTTCGAAA AGGTGCGCGA GTTGCCTGTC 
GTCATACAGC ATACGCGCAA TCGCGCCACG TTGCGTCGGC TCGAATCGGT CTACTACGAT
ACCGCGAAGC AACTGCTATT TCGACATGGC ATATCATTGC GCGTGCGGCG CAACGGCCGG
CATTTCGTTC AAACATTAAA GCTTCCACCC GCCGACGGCA GGCCTCTGGG ACGACGGCAG
CGGGATGTGC CGGTTGACAG TATCGTTCCG GATTTGGCAC GGCTTCCCGC CGATGAAATC
GGCCATCCGA TAATGGCGCA GATCAAGAAT ACGTTGGTGC CGGTTTTCAC GACGAAGGTT
CGCAGATATG TGCAGCGGCT CGATTTCCCC GATGCGTCGG CGGACATCGT ATTCGACGAA
GGGACGATCG AGGCCGGTAC GCAACAAGAA GCTGTATTTG AAATCAAACT CAAATTGAAG
AGCGGCAATG CGGGTGTTCT GCTCGATCTC GGAGGACAAC TGCTCGGCGC TGCGCCCCTG
CAATTCAGTG TCTGCAATAC GGCGGAGCGT GGCTACATGC TCGCGTTTGA TCTCGAGCGG
TCAGCGACGA AGGCCAGGCT GCCCGATATT GCCGCGGACG AGGTCGTCGA CAACGTCATC
GCGCGCCTGA TGGGATCATG CTGGCATCAT CTCGTGAAGA ATAGCGAGGT GGCGCAGGAG
GAGACAGATC CAGAAGGGGT GCACCAGATG CGCGTTGCGC TGCGCCGTTT GCGGACGGTC
TGCACGATGT TCCAGCACTA TATACCGTCG CCGGTATTTC AGGCGGTCAG CACCGAAGCA
AAGTGGGTGA TGCAGCAGCT CGGACGGACG CGGGACTGGG ATGTGTTCGC GGAGACCGCC
ACTCGCCTGG CTACAACCAT CCCGGAGATC GACCTGAGCG GCTTGCGCGA GGTGGTCGAG
CGGCAGCGCC AGTCGAACTA CGGCGCCGTG CAGGCTGCTC TCGCCGATCC CCGTTGCAGC
CGTTTTCTGC TCACGCTGGG CCACATGATA GAACGTCGTG GCTGGCGCAA TGAAATCGAC
AGCGAGGCGC TGGTCGTCCT GTCGCGGCCA ATGCTGGGAC TCGCGGACAA GATTTTAGCG
CGACTTCATC GTAAGGCGCT CAAGCGTGGC GTGCATTTCA ATCGCCTCGA CTCCGCCATG
CAACACAGGC TCAGAATTGA CGTCAAGAAA TTGCGCTACG CGGCGGAGTT CCTGTTACCG
CTTTATGCGG CTCACTTACC TGTAAAGCGC TACGTGAAGC GCCTCGCCGG GCTTCAAGCC
GCGCTCGGCG GAGCATGCGA CATCGCCAGC AGCCGCACTC TGATCGATGT AATCCGGCGG
AACGATCAAC CCGCGCTCGC TCTCGCCGCC GGCGTGGTCA CCGGCTGGCA GGCACGCGAC
CAGTTGGTGG CGGCGAAAGC GCTGCGCAAA AGATGGCGAC GATTCAAGAC GGCGGAGACA
TTCTGGAATC GGTGA
 
Protein sequence
MELRLLASRG AFEKVRELPV VIQHTRNRAT LRRLESVYYD TAKQLLFRHG ISLRVRRNGR 
HFVQTLKLPP ADGRPLGRRQ RDVPVDSIVP DLARLPADEI GHPIMAQIKN TLVPVFTTKV
RRYVQRLDFP DASADIVFDE GTIEAGTQQE AVFEIKLKLK SGNAGVLLDL GGQLLGAAPL
QFSVCNTAER GYMLAFDLER SATKARLPDI AADEVVDNVI ARLMGSCWHH LVKNSEVAQE
ETDPEGVHQM RVALRRLRTV CTMFQHYIPS PVFQAVSTEA KWVMQQLGRT RDWDVFAETA
TRLATTIPEI DLSGLREVVE RQRQSNYGAV QAALADPRCS RFLLTLGHMI ERRGWRNEID
SEALVVLSRP MLGLADKILA RLHRKALKRG VHFNRLDSAM QHRLRIDVKK LRYAAEFLLP
LYAAHLPVKR YVKRLAGLQA ALGGACDIAS SRTLIDVIRR NDQPALALAA GVVTGWQARD
QLVAAKALRK RWRRFKTAET FWNR