Gene Nham_1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_1013 
Symbol 
ID4031696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1132289 
End bp1132819 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID637969511 
Productphage tail Collar 
Protein accessionYP_576321 
Protein GI92116592 
COG category[S] Function unknown 
COG ID[COG4675] Microcystin-dependent protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0295632 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAC CCTATGTCGG AGAAATCCGG CTGTTCGGCT TCTCCCGCGT GCCGCAGGGT 
TGGCTCCCCT GCAACGGCTC GCTCCAGCCG ATCTCTCAGT ATGAAGTGCT TTTTTCGTTG
GTCGGAACGA CCTATGGCGG CGATGGTGTG ACGACCTTCG GCACGCCGAA CCTCAGCGGC
CGCGTCCCCG TTCACTCCGG GACCGGTCCT GGCGTATCGC CTCGCGTTAT CGGCGAGATC
GGCGGCAGCG AAAAGGTGAC TCTGCTATCG GCACACATGC CTTACCACGA TCATCCGATG
GTCGCGACGA CCGGGCCAGC CAATTCCAGC CAGATCACAC CGAGCCTCGA ACTCGGGACG
GTCGCGGGCG ATACCATGTA CACCAGCGAC GTGAAGGACG TGGGCGGCGC AAACACGGCA
CCGACATCGA CCTCGATGGC AGGCCGCAAT ATCCCGCACG ATAACCTCAT GCCCACGCTG
CCGGTGCAGT TCTGCATCGC GTTCGCTGGG ATTTACCCGG CTCAGAACTG A
 
Protein sequence
MSEPYVGEIR LFGFSRVPQG WLPCNGSLQP ISQYEVLFSL VGTTYGGDGV TTFGTPNLSG 
RVPVHSGTGP GVSPRVIGEI GGSEKVTLLS AHMPYHDHPM VATTGPANSS QITPSLELGT
VAGDTMYTSD VKDVGGANTA PTSTSMAGRN IPHDNLMPTL PVQFCIAFAG IYPAQN