Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_1013 |
Symbol | |
ID | 4031696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1132289 |
End bp | 1132819 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637969511 |
Product | phage tail Collar |
Protein accession | YP_576321 |
Protein GI | 92116592 |
COG category | [S] Function unknown |
COG ID | [COG4675] Microcystin-dependent protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0295632 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAC CCTATGTCGG AGAAATCCGG CTGTTCGGCT TCTCCCGCGT GCCGCAGGGT TGGCTCCCCT GCAACGGCTC GCTCCAGCCG ATCTCTCAGT ATGAAGTGCT TTTTTCGTTG GTCGGAACGA CCTATGGCGG CGATGGTGTG ACGACCTTCG GCACGCCGAA CCTCAGCGGC CGCGTCCCCG TTCACTCCGG GACCGGTCCT GGCGTATCGC CTCGCGTTAT CGGCGAGATC GGCGGCAGCG AAAAGGTGAC TCTGCTATCG GCACACATGC CTTACCACGA TCATCCGATG GTCGCGACGA CCGGGCCAGC CAATTCCAGC CAGATCACAC CGAGCCTCGA ACTCGGGACG GTCGCGGGCG ATACCATGTA CACCAGCGAC GTGAAGGACG TGGGCGGCGC AAACACGGCA CCGACATCGA CCTCGATGGC AGGCCGCAAT ATCCCGCACG ATAACCTCAT GCCCACGCTG CCGGTGCAGT TCTGCATCGC GTTCGCTGGG ATTTACCCGG CTCAGAACTG A
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Protein sequence | MSEPYVGEIR LFGFSRVPQG WLPCNGSLQP ISQYEVLFSL VGTTYGGDGV TTFGTPNLSG RVPVHSGTGP GVSPRVIGEI GGSEKVTLLS AHMPYHDHPM VATTGPANSS QITPSLELGT VAGDTMYTSD VKDVGGANTA PTSTSMAGRN IPHDNLMPTL PVQFCIAFAG IYPAQN
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