| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_1010 |
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| Symbol | |
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| ID | 4031693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 1123447 |
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| End bp | 1126383 |
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| Gene Length | 2937 bp |
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| Protein Length | 978 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637969509 |
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| Product | putative monovalent cation/H+ antiporter subunit A |
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| Protein accession | YP_576319 |
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| Protein GI | 92116590 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.246067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATGT CATATGAAAC GATCCTCATC GTCGTTCTCG CGCTTCCCTT CGCCGGGAGC
TGTCTTGCCG CGCTCCTTCA GGCCAATGCC CGCAATGCCG AAGCCTGGCT GGCGGGCGCA
GTTGCGCTCA TCAGTCTGGT GCTCCTGGCC GCGAGCTACC CCCGCATCGC CAACGGCGGG
GTCATCCGGC ATACCGTGGA ATGGGTGCCG GAACTCGGCC TCTATTTCTC TCTGAGGATG
GACGGTTTCG CCTGGGTGCT CGCCGCACTG ATTACCAGCA TCGGGTTCCT GGTGGTGCTG
TACGCCCGGT ACTACATGTC CCCCGCCGAT CCCGTGCCGC GCTTCTTCTC ATTCCTGCTC
GCCTTCATGG GTGCGATGCT CGGCATCGTA CTCTCGGGCA ACCTGATCCA GCTGGTCTTC
TTCTGGGAGT TGACCAGCCT CTTTTCCTTT CTGCTGATCA GCTATTGGCA CCAGACCGCG
CAGGCGCGGG ATGGCGCACG CATAGCGCTG ATCGTAACGT CGCTCGGCGG GTTTTGCCTG
TTCGCCGGCA TCCTGATTCT GGGACATATC GTCGGCAGCT ACGACCTCGA TCGGGTTCTG
GCGTCTGGCG CCACGATCCG TTCGCATCCG CTCTACATCC CGACGCTCGT CCTCATTCTG
ATCGGAGCCT TGACGAAAAG CGCGCAGTTC CCGTTCCATT TCTGGCTGCC GCAGGCGATG
GCGGCGCCGA CACCCGTTTC GGCCTACCTA CATTCCGCCA CCATGGTCAA AGGCGGAGTG
TTCCTTCTGG TGCGGCTCTG GCCTGCGCTG GGCGGAACAA ACGAGTGGTT GTGGCTCGTG
GGTTCTGCAG GACTTATCAG TTTCATCCTC GGCGCGTTCA TTGCTCTTTT CCAGCAGGAT
CTGAAAGGGC TGCTCGCCTA CTCGACCATC AGTCATCTCG GACTGATCAC TCTGCTCATC
GGCCTCGACT CACCGCTCGG GCAGGTCGCC GCCATCTTTC ACATCATGAA CCATGCGACA
TTCAAGGCGT CGCTGTTCAT GGCGGCCGGG ATCATCGACC ACGAAAGCGG CACCCGCGAC
TTGCGCCGCC TGAGCGGCCT GCGGCGCTTC ATGCCGATCA CGGCAACGCT CGCGATGGTC
GCTGCCGCCG CCATGGCTGG CGTCCCCCTG TTGAACGGGT TCTTGTCCAA GGAGATGTTT
TTTGCCGAGA CCATCGAAAC GCACGACAAC TCGCTGCTGG ATCAGGCGCT GCCCTATATC
GTCACGATGG CCAGCATGTT CACGGTCGCT TACTCGCTGC GGTTCATAGC CGAGGTGTTT
TTCGGTCCAC CGCCGCAGGA TCTGCCGCGC ACGCCGCATG AACCGCCGTT CCTGATGCGC
TTCCCCGCCG GGCTTCTCGT CCTCGCGTGT CTTCTCGTCG GCATCGTCCC CGGCCTTACC
ATCGGTCCTT TGCTCACGAC CGCGCTCCAC GCCGTCCTCG GCGACGCTAT TCCGAAGTAT
AGCCTTGCAG TCTGGCATGG CTTCACTCCC GAGTTCCTGA TGAGCCTGGT CGCGATTTCC
GGTGGCATAG CCATCTACCT GATGCTGCGC TCATATTTGC TCGTCACTGA AGGACCGCCG
CTACTGCGCC ACATCAAGGG TCAGCGCATT TTCGACCGCG TGCTCGTCGC CGTCTCGTGG
CAGTTCGCTA GACGGCTGGA GGTACTGCTT GGCACGCGCC GCTTGCAACC GCAGTTGCGG
TTGCTGATTT GCGCAGCGTT GCTGGTCGGC CTGGCGCCAG TGTTCACGCA AGGGATCGGC
TCCTGGGGAA TGACGCAAAC TGCTTTCGAT GTCGGGTTTG CTCTGATCTG GGCCGTAGGG
GGCGCTTGCG CACTGGCTGC AGCTTACCAC GGCAAGTTTC ATCGCTTCGC GGCCCTCATC
CTTGTCGGCA GCGCCGGGCT GGTGACGTGC GTCAGTTTCG TGTGGCTGTC TGCCCCCGAT
CTGGCGCTGA CCCAGCTGGT GGTCGAGACG GTCACCACGG TTCTGCTTCT GCTCGGGCTG
CGCTGGCTGC CGAAACGCGC CGAGAAAATC CATGCGGCCG GCTCGCCGGA ACCGGGCATC
CGCTGGTATC AGTTCCGCGA CATCGGCATC GCGGCTGCTG CCGGAGGGGG GTTGGGAGTG
CTGGCGTACG CGGTCATGAC TCGCCCCGAG CCGAGCAGCA TTGCGCGGTT CTTTGTCGAG
AACGCCTACG CCCTGGGCGG CGGGACCAAC ATCGTCAACG TCATCCTCGT GGACTTCCGT
GCGTTCGACA CGTTCGGCGA GATCACGGTG CTCGGCATCG TCGCGCTGAC CGTCTATGCA
TTGCTGCGGC GTTTTCGTCC TGCTGCCGAA AGCATTCCCG TGCCGGAGCA GCAGCACAGC
CAGGACCTCT ACGATGAGGC CCAACCGAGC CGTCAGAAGG GTGACACGCT CAAGAGCGCC
ATGTCCGTCC CCGCGCTCAT GATGGCAATG CTTTTCCCGG TGATTTGCGC GACGGCGATT
TTCCTTCTCC TGCGCGGGCA CGACCTGCCC GGGGGTGGAT TCGTCGCCGG CATCACGATG
GCGGTGGCCT TCATTCTCCA ATACATCGCC CGCGGAACCG CCTGGACGGA GGCGCATCTG
CGCATCCTGC CTGTGCATTG GATGGGCGCG GGCCTCCTCC TGGCGGCCTG TGCCGGAGCG
GGCGCCTGGT TGTTCGAACG GCCTTTCCTG AGCACGTCAT TCTCCTACCT CGAGGTCCCG
TGGATCGGCT CGGTCCCGCT GGCAAGCGCG CTGCTCTTCG ATCTTGGCGT GTTTGCGCTG
GTCGTCGGCG CAACGGTCCT GATGTTGATT GCGATCGCGC ATCAGACCGT GCGTAGTCAC
CGGGCCCCGG CCAGCCGTGC AGCGCCCGCG GCGTCTCCAA CGGCCGAGGT GCAGTAG
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| Protein sequence | MTMSYETILI VVLALPFAGS CLAALLQANA RNAEAWLAGA VALISLVLLA ASYPRIANGG
VIRHTVEWVP ELGLYFSLRM DGFAWVLAAL ITSIGFLVVL YARYYMSPAD PVPRFFSFLL
AFMGAMLGIV LSGNLIQLVF FWELTSLFSF LLISYWHQTA QARDGARIAL IVTSLGGFCL
FAGILILGHI VGSYDLDRVL ASGATIRSHP LYIPTLVLIL IGALTKSAQF PFHFWLPQAM
AAPTPVSAYL HSATMVKGGV FLLVRLWPAL GGTNEWLWLV GSAGLISFIL GAFIALFQQD
LKGLLAYSTI SHLGLITLLI GLDSPLGQVA AIFHIMNHAT FKASLFMAAG IIDHESGTRD
LRRLSGLRRF MPITATLAMV AAAAMAGVPL LNGFLSKEMF FAETIETHDN SLLDQALPYI
VTMASMFTVA YSLRFIAEVF FGPPPQDLPR TPHEPPFLMR FPAGLLVLAC LLVGIVPGLT
IGPLLTTALH AVLGDAIPKY SLAVWHGFTP EFLMSLVAIS GGIAIYLMLR SYLLVTEGPP
LLRHIKGQRI FDRVLVAVSW QFARRLEVLL GTRRLQPQLR LLICAALLVG LAPVFTQGIG
SWGMTQTAFD VGFALIWAVG GACALAAAYH GKFHRFAALI LVGSAGLVTC VSFVWLSAPD
LALTQLVVET VTTVLLLLGL RWLPKRAEKI HAAGSPEPGI RWYQFRDIGI AAAAGGGLGV
LAYAVMTRPE PSSIARFFVE NAYALGGGTN IVNVILVDFR AFDTFGEITV LGIVALTVYA
LLRRFRPAAE SIPVPEQQHS QDLYDEAQPS RQKGDTLKSA MSVPALMMAM LFPVICATAI
FLLLRGHDLP GGGFVAGITM AVAFILQYIA RGTAWTEAHL RILPVHWMGA GLLLAACAGA
GAWLFERPFL STSFSYLEVP WIGSVPLASA LLFDLGVFAL VVGATVLMLI AIAHQTVRSH
RAPASRAAPA ASPTAEVQ
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