Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0959 |
Symbol | |
ID | 4031797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 1062152 |
End bp | 1062784 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637969462 |
Product | autoinducer synthesis protein |
Protein accession | YP_576272 |
Protein GI | 92116543 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0369652 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTCACA TCGTCACGGC GGAAAATATC GGTGCGTACC AGTACGAGAT GGAGCAGGCT TATCGATTGC GTCACAATGT CTTTGTTGAC GAAATGGGAT GGGAGGATAT GCGGAAGCCT GATGGCCGGG AGATCGACCA GTTTGACGAC GGCCGCGCAA TCCACATGCT CCACGTCGAC GAGGGTCGCG TCCTGGGATA TCAAAGAATG CTACCCACGA TGCGCCCTCA CCTCCTCACC GAGGTGTTGC CCAACCTGTG TGAAGGCGAT TTCCCTGTAG GGCCGCATGT TTGGGAGTGG ACACGCTATT GCGTGACGTG TGAACATCGC GATCGTGGGC GTATTCTGAG TCCGGCCGGC AACCTTCTTT TGTCATCCAT TGTCGAATGG GGCCTGGCGA ATAGCGTCAA AAAAATCGTC ATCGAGATGA ATCCGTTGTG GCTGCTTCGC TTGGTGCAAT TGCACTTCCG CGTGACGTCC CTTGGTTTAC CCCAACAGAT CGGGGAGGAC TCCATTGTCG CCGTTACCGC GGCGTTCGAC CGACGTACAC TTAGAAAGCT GCAAGAGATG CGTGGCAATG ACCTCCCGGC CATTGTGACC CAACCGGAAG CCGACCGGCG GTCGCTCGCT TAG
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Protein sequence | MIHIVTAENI GAYQYEMEQA YRLRHNVFVD EMGWEDMRKP DGREIDQFDD GRAIHMLHVD EGRVLGYQRM LPTMRPHLLT EVLPNLCEGD FPVGPHVWEW TRYCVTCEHR DRGRILSPAG NLLLSSIVEW GLANSVKKIV IEMNPLWLLR LVQLHFRVTS LGLPQQIGED SIVAVTAAFD RRTLRKLQEM RGNDLPAIVT QPEADRRSLA
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