Gene Nham_0955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0955 
Symbol 
ID4031774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1056056 
End bp1056871 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content64% 
IMG OID637969458 
ProductABC transporter related 
Protein accessionYP_576268 
Protein GI92116539 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGG CCGCAATCGC CACCGAATGT CTCGAGGCAC GCGCTGTGCA TTTCCGGCGC 
GGGACGCGCG TCATTCTGTC TGACATCACC CTCCGCCTCC ATTCGGGCGA GATCGTCGCG
TTGCTCGGAG CCAACGGCGC CGGCAAGAGC ACGCTGTTTC GCATCCTCCT GGGCTTTCTC
AAACCCGAGC ACGGCGAGGT TCGGCTCAAC GATGAACTGC TCGCGGCATT TTCACGCCGG
GCGCTGGCGC AGCGCATCGC CTATGTGCCG CAAGCGCACA TCGCGCCGTT TCCTTATAGA
GTGCACGACG TCGTGCTGCT TGGCCGGCTT GCCGAGACGG GCATCTTCCG CACCCCGCAG
CCCGCCGATC ATCAGGCGGT GGGGGAAGTT CTGGAGCGGC TGGCGATCAC GCATCTTGCT
GCGCGCCCCT ATACCGAGAT TTCAGGCGGC GAGCGGCAAT TGACCCTGAT CGCCCGCGCA
CTCGCGCAGG GCGCCAGCAT CCTCGTCATG GACGAGCCGA TGACGGGGCT CGACTATGGC
TATCAGGTCC GGCTGCTGCA GCATTTGATC GATCTGGCGG GCAGCGGCCG CACGATTCTA
TTGAGCACCC ACAATCCGGA ACACGCGGTG CAGGCCGCAA CACGCATAGC CGTGCTGCGC
GACGGCGCGA TCATGGCGGA TGGCCCACCA GCACAAATTA TCACGCCATC ACTCATTCGC
GCGCTCTACG GTGTTGCGGT CTCGACCTTG ACGAACGCCG AAGGCCGGAT GGTGATCGTG
CCGACGATGG AGCGTGTGTC GCCGATTGGG GCGTGA
 
Protein sequence
MITAAIATEC LEARAVHFRR GTRVILSDIT LRLHSGEIVA LLGANGAGKS TLFRILLGFL 
KPEHGEVRLN DELLAAFSRR ALAQRIAYVP QAHIAPFPYR VHDVVLLGRL AETGIFRTPQ
PADHQAVGEV LERLAITHLA ARPYTEISGG ERQLTLIARA LAQGASILVM DEPMTGLDYG
YQVRLLQHLI DLAGSGRTIL LSTHNPEHAV QAATRIAVLR DGAIMADGPP AQIITPSLIR
ALYGVAVSTL TNAEGRMVIV PTMERVSPIG A