| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0948 |
|---|
| Symbol | |
|---|
| ID | 4031767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 1047883 |
|---|
| End bp | 1048662 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637969454 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_576264 |
|---|
| Protein GI | 92116535 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATG ACGCACTCGC GGTCGGATCC GGGACACTGG TGGGGTTCGT TCTCGGACTG
ATCGGTGGAG GAGGTTCTAT CCTCGCCGTC CCGCTTCTCG TCTATGTGGT AGGCGTACAA
TCAACACACG TGGCCATCGG GACTAGCGCG GTGGCCGTCG CACTGAGCGC GCTATCGAGC
CTGGTCGCTC ATGCCCGCGC CGGCAATGTG CGTTGGCCTT GCGCGCTCGT GTTCGCGGCC
TGCGGCATCG TCGGCGCCGG TCTGGGTTCG ACGATAGGCA AGTCGTTCGA TGGCCAACAG
CTGCTCTTCC TGTTCGGATT GCTAATGATC GTCATCGCAC TCTCGATGCT TAGAGGACCG
AGAGGCGAGA TCAAGGGATT CGTACCCTTG ACGAGGGAAA ATGCGGCAGC GGTAGCACCG
CGTTTGGCGG TTTTCGGAGG CGGGGCAGGT CTGCTAGCAG GATTCTTCGG TATCGGCGGC
GGTTTCCTCG TCGTGCCGGG CCTCGTTGCC GGAGCTAGAA TGCCCTTGTT GGGTGCAATC
GGATCGTCGT TGGTGTCGGT CTTCGCCTTC GGACTTACGA CGGCCGCGAA CTACGCCCTT
TCCGGATTAA TCGACTGGCA GTTGGTCGTC CTGTTTGTAC TGGGCGGCAT CGCCGGCAGT
CTTTTCGGCG GCCGGATTGC CGCGCGGCTG GCAAGCCAAA AGAGAACCCT GTCTATTGTG
TTCGCCGTGA TAGTCGCGAG CGTTGGTGTC TACGTCGTGG TCCGCGGACT CGTCGGCTGA
|
|---|
| Protein sequence | MVHDALAVGS GTLVGFVLGL IGGGGSILAV PLLVYVVGVQ STHVAIGTSA VAVALSALSS
LVAHARAGNV RWPCALVFAA CGIVGAGLGS TIGKSFDGQQ LLFLFGLLMI VIALSMLRGP
RGEIKGFVPL TRENAAAVAP RLAVFGGGAG LLAGFFGIGG GFLVVPGLVA GARMPLLGAI
GSSLVSVFAF GLTTAANYAL SGLIDWQLVV LFVLGGIAGS LFGGRIAARL ASQKRTLSIV
FAVIVASVGV YVVVRGLVG
|
|---|
| |