Gene Nham_0943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0943 
Symbol 
ID4031762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1036359 
End bp1043345 
Gene Length6987 bp 
Protein Length2328 aa 
Translation table11 
GC content60% 
IMG OID637969449 
Productfilamentous haemagglutinin-like protein 
Protein accessionYP_576259 
Protein GI92116530 
COG category 
COG ID 
TIGRFAM ID[TIGR01901] filamentous haemagglutinin family N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTTTGATA TTGCTGGAGG ATCGATACAG GCGCATGGTT GCTCTGCAGT TGATCCACGC 
CTAAACCCGT CTTCCCCATT CTCGCTTAAA TCCTTCAGGA CATCTTTGTT GGCGACTGCG
GCGATCTGCG CCGTGATGGT TTTTGCGCGC CCGGCGTCGG CGCAGAGCCC GACCAGCGGC
AATGTGGTCG CGGGCGCGGC CAGCATTTCA CAGGCGGGCG CGGTCACCAA CATCAACCAG
TCCTCGCAGA AGGCTATCAT CAACTGGCAG GGTTTCTCGG TCGGCGCGCA GAACACCGTC
AACTTCAACC AGCCCAGCAG TTCGGCGGCG ACGCTCAACC GCGTCATCGG CAACGAGCAA
AGTGTCATCA ACGGCGCCAT CAACGCCAAC GGTCAGGTGT TCATCGTCAA CTCCAACGGC
GTGTTGTTCG GCCAGGGCGC GCAGGTCAAT GTCGGCGGCC TCGTCGCCTC GACGCTGGAT
ATTTCCAACA ACGACTTCAT GGCCGGGAAC TACAAGTTCT CGGGCACATC GAATGCGTCC
GTCGTCAACC AGGGCCGCAT CCGCGCGCAT GGCGGGGGTT ATGTGGCGCT GCTCGGCAAG
ACGGTGTCGA ACGAGGGCAT GATCGCGGCC AAGCTCGGCA CGGTGGCGAT GGCGGCCGGC
GACAAGATCA CATTGAACTT CGGCGGCGAT TCGCTGCTGG ATGTGACGAT CGACAAGGGC
ACGCTGAACG CGCTGGTGCA GAACAAGCGC GCGATCATCG CCAATGGCGG GCAGGTGATC
ATGACGGCGA AGGCGGCCGA TCAGGTCTTG TCGGCGCAGG TCAACAATTC CGGCATCATC
CAGGCCCGCA CCATGGCGGC GCTGAAGGGG GGCTCCAACG GCGGCACCGT GAAGCTCGGC
AAGATCAAGC TGCTGGCGCA GGGCGGCACC GCCAAGGTCT CCGGCAAGCT CGACGCCTCC
GCTCCAAAAG GCGGCGACGG CGGCTTCATC GAGACGAGCG GCGATCACGT CAAGATCGCG
GACGATGCGG TGATCACCAC CAAGGCCGCG AGCGGCAACA GCGGCGCCTG GCTGATCGAT
CCGACGGATT TCAGTATCGT TACCGGCAGC AGTGCCCAGA CCGACAGTGG CATCGGCGTC
GCTACGCTTC TGAGCAATCT TGCGAATGGC GACGTCACAA TCGTGACGTC CTCGGCCGGA
ACCGGCGCGG GCGACATTAA TATCAATGCG GCGCTGAACT GGTCTGCGAC GTCGGCGACG
CCATCGACCC ATTCGCTGAT CCTGGCGGCG GCGAACAACA TCAACGTCGA CGCGCCGGTA
ACCTGGTCGG CAGGCACGCT GACGCTGAAC GCCGGCGCCA ATGTTTACGT CAATGCTGTC
ATGACGGCGA CCGGCACGGC GAATTTCGCC GCCAATTACG GGCATGTGAT CAATTCGAAC
GGCAGCGTCT CCGCGACAGT CACCGGTACT GGCGTCAATG CAGATGAGGT TACGCCCTGC
GGACTCTACA CGCTGCAGGG TGTCGCAAGC TCTGGAGCGT TCGCTGGCCG CATCGATTTC
AGCGGCACCG GAATGGTCAC ACTAAACGGG ACGCAGTATA CCGTCATAAG CAGTGCAACG
GGTCTCCCGT CGGTTACAAT GAGCGGTAAT TACGTTATCG GCGCCAACTT CAGCGTCAGC
ACGCTGACGA GCCTCGGAAC GGCTGCCGAC CCATTCGTGG GTGTCTTCAA CGGATTGGGC
CACACGATCA CCGTCAATAC CCAAACCACC GGCACTGGCT TTTTCGACAC CATCGGCACG
ACCGGTGTGG TTAGCAACCT TACCGTCAAC GGACTCGTCA AAACCGCCGC CAACAACCTC
GGCGCGAATA CCACCGATCC GACCGCCAAC CTGACCGCGC TCGGCCTGTT CGCCGATATC
AACAGGGGCA GCATTTTCAA CAGCTTCGCA GCGGGTCCCT CCGGCACCGG CACCGTTCAG
GTGCAGAGTA ACGCCTCCGT CACCGACGTC GGCGGTTTTG TCGGCGAGAA TTTCGGGTTG
ATCGCCAACA GCTATACTCT CGGCGGCGTC GGTGTTGGTG GCACGACAGC CAATCTGGGC
GCTAGCGCAA CGAACGTCGG TGGATTCGTC GGCTTTAACG AGACCGACGG TTCCATCTAC
ACCAGTGCCG TTCGGTTGAA TGACCGCGGC TTCCCCGGCA GTGTCTGGGT CGGTGGGGGG
CCGACGACGT CGATTGCCTA CGCCGGCGGG TTTGCGGGCG AAAACGCCGG TTTGATCTCG
CAGAGCTACA ATAGAGCAGG CGTTGGAATT GTGCAGCCCG GCGATTCCAC GCCACAATCC
ACCATTATGA TTGCCGCCGG CTTCGTCGGC AACAACACGA GCACGGGTAC GATCGATCAA
TCCTATGTAA GTTTCGGTCA AGTCACGAGT GCGCAGGAAG TAGGCGGTAC GCACACGGCC
GGATTCGTCG GCGACAACGC GGGCACCATC ACAAACTCCT ACACCCTGGC GCCGCAGCAA
GCGCTCGTCA GTTCACAGGA TATAGTAGGT CAGCCGCATT GGGATTCCGG CTTCGCCTAC
AGCAATTCCG GTACGATCTC CACGTCGTAT GCCGAAACGA ACAGCAACAT CCCCTATGGG
TTTGTGGCCA TCAATAATAG CGGGACAACC ACGAACGACT ATTATGTCGT GAGGGGCGAT
ACTGCAGTAA GCGCCGGTCC AGCGGGAGTA ACGGCGACGC AAGTGACGAC ATTGGCAGCG
AACAATATTA CCAGCTTCGT CGGATTCGAT CTGGCCATTT GGGGAGGCGC GAGCCGTACC
ACACTCCTCA ACGGCGTCAG CAACCTCAAG GACGATGGTA CATTAATCGT CAATGATACG
CCGATCCTCC GGCAACTTCC GGTTCTGGTC GGACCCACAT CTTCCGTGGC GAGCTATGGC
ACTGCGGCGA GCACCTTTCT TACCAGTAAT TACTTCACCG TCGTGGGCGC GCAGGGTATT
GATAGTACCG TTTATAGTTT TTACAACAGC GATAATTCGG TACAGTATTA TACAGGTACT
CCCCTTAATC AGTTCGGACT GACCGGCTAT CCCGATGCTG GCATCCATCT CGTAAGTGAT
GCCCTGATAT CGTCGCTCTA TACGAATGTT CAGGGTATTT TCACCATCAA TCCAAAGACG
TTGACGCTTG CAAGCGGTGT CGTCTCGAAC AAGACCTATG ATGGCACTAC AGCCGCCACA
GTGAACAACG GTCTGGCGAA CGACGGCCTT GTCGGTCTCG TCGGCGACCA GACATTGGAT
GTCACGTATC AATCTGCTGT CTTCAATAAC AGGAATGCTG GATCGCAAAC GGCGGATGTT
GTTTACACCG CTTCCGATGG AACAAACGGC GGCAAACTGA CCAATTACAC CATCGCCACC
ACAGCTACTG CGACGATCGC GCCGAAAACC CTCAGCGCCG GGTTCACGGC GTTGGACAAG
ACCTATGATG GCTCGGTTAA CGCCACTGTC GCCACTACGC AATTGCCGGG AGTCATCGGC
AGCGACAATG TCGTTCTTAA CTACACTTCC GCGCAATTCA ACGATGCGAA TGCAGCCGTT
GGCAAGACGG TCGCCCTGGC TGGCCTCACT CTGACGGGGG TAGACAGCAG CAACTATGCG
CTGCAAGCCA CCTCGATCCA GTCGAGTGCG ACGATTTCGC CACGGCCGCT GGATCTTTAC
GGGACGGAAG TCGCGGCAAA CAACACCAGC TTCGCGGCCG GCAATCTTTT CGTCAAGAAC
ATGGTCGTGG GTGATCAGGT CGCCCTGAGC GGGACTGTCA CGCTGGCCGG AACAGCCGCG
GGCATTCAGC CCATCGTCAA TTTCAGCAGT GCGACGGTCA ACAACCCGAA TTATACGCTC
ATCGGCGCGA CCGGCTCGGT CGTAGTCGGC AACGTCAGCC TTGCCGTGGA TCATGTCCCT
AACGGCACGA ACATCACCTC CTTCGGTACT ACGACGGTCG TGACCCAGAC GTTACCCAAC
ACGATCATCG ACTGGCTACG CTTCAATATC GCAAGTAACG AAACCGTCGA TTTCATTCAG
CCGTCTTCGA CCTCGGTCAT TCTGAACAGA GTGACCGGCA ATGAACAGAG CGTCATTGCT
GGAGCATTGA ATGCGACTGG CCGGGTTTTC ATCGTCAACC CGAATGGAAT TTTGTTCTCC
AGCACGTCAC AGGTCAATGT CGGTGCGCTG GTTGCGAGCA CGTTGAACAT CAGCGACAAT
GATTTTGCCA ACGGAAACTA TAGTTTTGCG GCATTAGACG GGATGGGATC GGTTACCGCC
CGGGGCGCCA TCACCGCCGC AAGCGGCGAA TTCATCATAC TCGCTGGCAA TGGCGGCGTG
ACAAACTCTG GCAGCCTAAA GGCGCCGGGT GGTTCGGCAG TGCTGGCAGG TGTCAACAAC
CTGACCCTGG CCATGAATAC GGCCGAGCCG GGCCTTACCA GCTACACGCT TGCCGACGTC
ACAGGCACCA CGACGGTCAG CGGCAACGTC AATGTCGCGT CGGCCACCAC CGGTGGCAAT
GGCGGCATTT TCGAGACGGC TGGCGAGGTC ATCGCGGTCA ACAACGGCTT TTTGCTGGAC
ACCGGGATAA GCGGTACGTG GTCGTACAGT CAGAACGCCG ATATCGTGAT AGGCTGGGGG
CAGACCTTCA CGGCCGACCT CGTCCAAAAC AACTTGGCGG TCCGCGATCT CAAGCTCACG
TCGTATAAGG GCAATGTTTT GCTCAACGAC GCGATGTCCT GGTCAAGCGA CAACGATCTG
ATGCTTACCG GGAACAATGT CACGATCAAC AATACGGTCG CCTGGTCCGC CGGAACGCTG
ACGCTGAAGC CCGGCACCGC CAGCGGCTTC ATCAATCTCA ACGCGGTGAT GACCGCGTCT
GGAACGGCCA GCCTGGTGAT GAGCTACAAT ACCGGGATGA ACACGAGCAC GGAGATCGCC
ACGAAGAATT CTGGCGCCAC CCCGGACACA AGGCCGACGG AAACGTATGG AACGCTTTAC
GGCGGTATCA ATCCGCTGTT CGACCCCGCG AGTGGAACCT TCATTGGCAG GGTCGATTTC
GTGAACAATA CCGCTATCCA TCCGCTTAAT ATCAACAGCC ATGACTACGT CCTCATCACC
AGCATGCAGC AGTTGGACAT GCTGGACGGG TTTGCCTCGA CGGCGGCGAC CGGTAAACCC
ACGGTGGCGC CTGCCGCTGT GACGAACTAC TATGCCCTCG CTTCGGATAT CGAGGCTTGC
GGTGTAAGTT CGACCTGCGC GACACAGGTC ATCTACACAT CTTCGCCCAT CGCCACCCTT
ACCGGCACCC TGGAAGGACT TGGACATACC ATCAACAACA TGACGATCGT TCCGGTGAAG
GCGGCCGACG GCACCATAGG GCTGATCGGC ACTCTCGGAA CCAGCGCCGG CGGCCTTTCG
AGCGGCACGG TGCGCGATAT CGGCATTGTC AGGGTCGAGA TCGATGGCAG CATGGTGAAC
CCGGACATCG GCGCCGGCAC GGTCGGCCCG CTGGTGGCGC TCAACTACGG CTCCATCGTC
AATGCCTTCG CGACCGGTAA CCCCGACGCG AAAGTGCCGG CGGGAAGTGC GTTCGACGGA
ACACTGGTGC CCGAGACGAA CTCGGTGAAG ATAACCGCTG CGCTCTCGGG GGGGAATAGT
GTTGGCGGAC TGGTCGGCAA CAATACCGGC CTGATTGTCA ACTCCCATTC CGACGTTTCA
GTTTACAGCC GAACTGGCTC GACCGGCGGA CTGGTCGGGT CGAATACCCG TGCCGTTAAC
CGTCAGACCG GTATCATTCT GAATTCCTAC GCCACCGGCA CGGTGTCAGG CGGCCAATAC
TCGACCGGTG GCTACCTTGG CAGCAACTAC TATGGCGGAT TCGTCGGGTA CAACAATGGC
GGCATCATTT CCAATTCCTA TGCCAGCGGC GACATATGGA CGGCGAATAG TGGTACCGTA
GGTGGTTTCG CCGGGTATAA CGCCAGCGTC GGTGGTGTCG CGGCGCTCAA TCACGTCTTC
TCCTCAGGGA CTGTGACCGT CAACTGGATG GCGCTCGCCG GCTCCGGCCA GAACGCCGGC
GGGCTGGTGG GACGGAACAA TGCCACCATC GTTGACGGCA ACACGACTTC CAAGGTGATC
GTCAACACGG ATACGCCAGA CCTTACGTTC CCCTACTTCA ACAACATCGG CACATTGGTT
GGCTATCAGG ACTTCAACGG GAGCGTGGAT ACCAACTCTC ATGCCTACGG AACGTCTACA
GAGAACGTTC ACGGGGCGGT CTGGCCAGGG AGGGGGCCTG GACAACTTGT CGGTATAGAC
TGGCCTGGCA ACACTCAGTC CCTGTCTGAT AATTTTTTGC CGGGCGGGAC TCCACCATCG
ACGGTCCAGA GCACGATGCA GGCGGCGCAG CAGGCAGCAG TGCAACAGGC TGTTGATGCG
CGGACTACCG GGAGCGCTCC CACGGTTGTA GGTGGCGGCA CCAACACCAA CACCGGTGCA
CCGGCTGCGA CTGCCGAGGG TGCAACGGCC GAGGGTGCAA CGGCCGGGGG TGCAACGGCC
GGGGGTGCGG CTGCCCAGCA GGCTCTGGTC CAGCAAGCGG GCAGTATAGC GAATGCGATC
ACGAGCAACG TGCAGAACTC GTCCCTAACG CCGCCCGATC CCGCGTTGGC GAACGCCGGC
GCAGCGGCTG CGCAATCCGT GAAGTCGGCG GCGGTAGAGG AGTCGGTCAA GTTAGTTGAC
GACGCCGTCA AGGCCGATGA CGACCGGCGC AAACGTGAGC GCGAGCGTCG TCGTACTGCG
CAGACCAGCC ACCACCGCGG CCATACGGGA GGTGGAAACG GTGGCGGTCT CGGCGCGACC
ATCCGCTCGA TCGACGTCAA CGGCCAGCGT TTCAACCTGC AGGACGGCGC TCCGAAGCAG
GACGCTCCGG CTCAGGCTCC GCAATGA
 
Protein sequence
MFDIAGGSIQ AHGCSAVDPR LNPSSPFSLK SFRTSLLATA AICAVMVFAR PASAQSPTSG 
NVVAGAASIS QAGAVTNINQ SSQKAIINWQ GFSVGAQNTV NFNQPSSSAA TLNRVIGNEQ
SVINGAINAN GQVFIVNSNG VLFGQGAQVN VGGLVASTLD ISNNDFMAGN YKFSGTSNAS
VVNQGRIRAH GGGYVALLGK TVSNEGMIAA KLGTVAMAAG DKITLNFGGD SLLDVTIDKG
TLNALVQNKR AIIANGGQVI MTAKAADQVL SAQVNNSGII QARTMAALKG GSNGGTVKLG
KIKLLAQGGT AKVSGKLDAS APKGGDGGFI ETSGDHVKIA DDAVITTKAA SGNSGAWLID
PTDFSIVTGS SAQTDSGIGV ATLLSNLANG DVTIVTSSAG TGAGDININA ALNWSATSAT
PSTHSLILAA ANNINVDAPV TWSAGTLTLN AGANVYVNAV MTATGTANFA ANYGHVINSN
GSVSATVTGT GVNADEVTPC GLYTLQGVAS SGAFAGRIDF SGTGMVTLNG TQYTVISSAT
GLPSVTMSGN YVIGANFSVS TLTSLGTAAD PFVGVFNGLG HTITVNTQTT GTGFFDTIGT
TGVVSNLTVN GLVKTAANNL GANTTDPTAN LTALGLFADI NRGSIFNSFA AGPSGTGTVQ
VQSNASVTDV GGFVGENFGL IANSYTLGGV GVGGTTANLG ASATNVGGFV GFNETDGSIY
TSAVRLNDRG FPGSVWVGGG PTTSIAYAGG FAGENAGLIS QSYNRAGVGI VQPGDSTPQS
TIMIAAGFVG NNTSTGTIDQ SYVSFGQVTS AQEVGGTHTA GFVGDNAGTI TNSYTLAPQQ
ALVSSQDIVG QPHWDSGFAY SNSGTISTSY AETNSNIPYG FVAINNSGTT TNDYYVVRGD
TAVSAGPAGV TATQVTTLAA NNITSFVGFD LAIWGGASRT TLLNGVSNLK DDGTLIVNDT
PILRQLPVLV GPTSSVASYG TAASTFLTSN YFTVVGAQGI DSTVYSFYNS DNSVQYYTGT
PLNQFGLTGY PDAGIHLVSD ALISSLYTNV QGIFTINPKT LTLASGVVSN KTYDGTTAAT
VNNGLANDGL VGLVGDQTLD VTYQSAVFNN RNAGSQTADV VYTASDGTNG GKLTNYTIAT
TATATIAPKT LSAGFTALDK TYDGSVNATV ATTQLPGVIG SDNVVLNYTS AQFNDANAAV
GKTVALAGLT LTGVDSSNYA LQATSIQSSA TISPRPLDLY GTEVAANNTS FAAGNLFVKN
MVVGDQVALS GTVTLAGTAA GIQPIVNFSS ATVNNPNYTL IGATGSVVVG NVSLAVDHVP
NGTNITSFGT TTVVTQTLPN TIIDWLRFNI ASNETVDFIQ PSSTSVILNR VTGNEQSVIA
GALNATGRVF IVNPNGILFS STSQVNVGAL VASTLNISDN DFANGNYSFA ALDGMGSVTA
RGAITAASGE FIILAGNGGV TNSGSLKAPG GSAVLAGVNN LTLAMNTAEP GLTSYTLADV
TGTTTVSGNV NVASATTGGN GGIFETAGEV IAVNNGFLLD TGISGTWSYS QNADIVIGWG
QTFTADLVQN NLAVRDLKLT SYKGNVLLND AMSWSSDNDL MLTGNNVTIN NTVAWSAGTL
TLKPGTASGF INLNAVMTAS GTASLVMSYN TGMNTSTEIA TKNSGATPDT RPTETYGTLY
GGINPLFDPA SGTFIGRVDF VNNTAIHPLN INSHDYVLIT SMQQLDMLDG FASTAATGKP
TVAPAAVTNY YALASDIEAC GVSSTCATQV IYTSSPIATL TGTLEGLGHT INNMTIVPVK
AADGTIGLIG TLGTSAGGLS SGTVRDIGIV RVEIDGSMVN PDIGAGTVGP LVALNYGSIV
NAFATGNPDA KVPAGSAFDG TLVPETNSVK ITAALSGGNS VGGLVGNNTG LIVNSHSDVS
VYSRTGSTGG LVGSNTRAVN RQTGIILNSY ATGTVSGGQY STGGYLGSNY YGGFVGYNNG
GIISNSYASG DIWTANSGTV GGFAGYNASV GGVAALNHVF SSGTVTVNWM ALAGSGQNAG
GLVGRNNATI VDGNTTSKVI VNTDTPDLTF PYFNNIGTLV GYQDFNGSVD TNSHAYGTST
ENVHGAVWPG RGPGQLVGID WPGNTQSLSD NFLPGGTPPS TVQSTMQAAQ QAAVQQAVDA
RTTGSAPTVV GGGTNTNTGA PAATAEGATA EGATAGGATA GGAAAQQALV QQAGSIANAI
TSNVQNSSLT PPDPALANAG AAAAQSVKSA AVEESVKLVD DAVKADDDRR KRERERRRTA
QTSHHRGHTG GGNGGGLGAT IRSIDVNGQR FNLQDGAPKQ DAPAQAPQ