Gene Nham_0933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0933 
Symbol 
ID4031927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp1027407 
End bp1028159 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content63% 
IMG OID637969440 
Productphenylacetic acid catabolic 
Protein accessionYP_576250 
Protein GI92116521 
COG category[S] Function unknown 
COG ID[COG3396] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGATA CGATGACTAT CGAGGACTAT CTCGCCCAGG GTGGTGTGCT GACCGCACCC 
GACAATGCGC CGGCGCGCTA TCGCGGCGAG TTGATGCGGC TGATGTCGTC TTTCGTCGAC
AGCGAACTGG CGGCCTCTGC CGGTTTCGCC GGAGCGATCA ACTTCGCGCC CGGCATCAAG
GAGCGCATCG CGGCAAGCCG CATCACGCTT GAGAAGGCGG ACCACGCCCA GCGCGTTTTG
AACATCATGA GCGACTTCGG CACCGATGCC GACCGCTACC AGGCGCAGCA CGACTGGAGC
GCGCGGGTCG AGCGCAACGC CGATCTCGCC GCGGCGCACC GCGGCGACGA CATGCGACTC
GCCGTCTTTC ACTACCCGAT CGAGAACTGG ACCGATGCGG TGGTGATGAA CGTGCTGCAA
GGATTGGCGG CCGGCATTCA GATGAACGAA CTGACCCGCG TCTCCTATGC CCCGCTGGCG
GATGTCTTCC GCGAGATCGC ACCGCGCGAA CGGCGCCATG CTGAACTGGG CTACGAGGGC
CTGCAACGGA TTGCCTCGAC ACCAGAGGGC AAGCAGGCCG CGCGGGAAGC AATCGCCTAC
TGGAAACCGC GAGTTGCGAC CACTTTCGGT GTCGCCGGCT CGAACCGTTT CGATACGCTG
AAAAAATTCG GCCTGCGCCA CACCTCCAAC GAGGAATTGC TGGCGCAGTG GCAAACCGTG
ACCGGCGAAA AGCTCGACGT GCTTGGTCTG TAG
 
Protein sequence
MSDTMTIEDY LAQGGVLTAP DNAPARYRGE LMRLMSSFVD SELAASAGFA GAINFAPGIK 
ERIAASRITL EKADHAQRVL NIMSDFGTDA DRYQAQHDWS ARVERNADLA AAHRGDDMRL
AVFHYPIENW TDAVVMNVLQ GLAAGIQMNE LTRVSYAPLA DVFREIAPRE RRHAELGYEG
LQRIASTPEG KQAAREAIAY WKPRVATTFG VAGSNRFDTL KKFGLRHTSN EELLAQWQTV
TGEKLDVLGL