Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0926 |
Symbol | |
ID | 4031920 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 1021958 |
End bp | 1023259 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637969434 |
Product | fumarylacetoacetase |
Protein accession | YP_576244 |
Protein GI | 92116515 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
TIGRFAM ID | [TIGR01266] fumarylacetoacetase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.523606 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACCCGA ACGATCCCAA GCTTTGCGCC TTCGTTGATG TTGATGCGGC ATCCGACTTT CCGATCCAGA ACCTGCCTTA CGGAGTGTTC TTAACGCCGG AGCAGCCGGA GTTGCGCGTC GGCGTGGCGA TCAGCAATCA GATTCTCGAT CTCGCCGTGC TGGAAGCCGC CGGTCTGATC CGTTGCGACG GGGTTAGCGG AGTTTTTGCA AAGCCTTCGT TGAATGCCTT CATGGCGCTC GGACAGACGG TGTGGTCGCA GACGCGCGCG CGGATTAGCG AATTGCTGCG TCATGATAAT CCGGAACTGC GCGACAATAC GAACTTGCGC GTGCGCGCGC TTGTACCTCA GAATCTCGCG CAAATGTATA TGCCGATCCA CGTCGCAGGC TTCACTGACT TCTATTCCTC GAAGGAACAC GCCACCAACG TCGGCACCAT GTTCCGCGAT AAGACGAATC CGCTGCTGCC GAACTGGCTG CATATTCCCA TCGGCTACAA TGGCCGGGCA TCGACTGTCG TGGTCAGCGG CACGCCGATC CGTCGCCCAC GCGGGCAGTT GAAGTCGCCA ACGGCGGAGC TTCCGAACTT CGGCCCGTGC CAGCGGCTCG ATTTCGAACT GGAAATGGGC GTCGTGATCG GGCAGGCCTC CGCGATGGGC GAGATGTTGA CCGAACGACA AGCGGAAGAG ATGATCTTCG GCTTCACGCT GCTGAATGAC TGGAGCGCGC GCGATATCCA GCAATGGGAA TACGTGCCGC TTGGGCCGTT TCAGGCGAAG GCATTCGGCA CGTCGATCAG CCCGTGGATC GTGACGCGCG AGGCATTGGA GCCGTTTCGG GTTCAGGGTC CGGCGCAGGA GCCGAGGCCG TTACCTTATC TGCATCAGGC ACAACCGAAC AATTACGACA TACAGCTCGC AGTAGACCTG CGAACGGAGA AGATGGCAAA GCCGGCCAGC ATCTGCCGGA CCAATTTCAA ATACATGTAC TGGTCGTCAG TGCAGCAGCT CGTGCATCAT GCCTCTTCAG GTTGCGCAAT GAATGTCGGC GATCTTTTGG GTTCAGGCAC CATCAGTGGC CCCGAAAAGG GCGAGCGCGG CAGCATGTTG GAGCTAAGTT GGAACGGGAC CAAGCCGCTT GAGCTTGATG GTGGCGAGCG CCGTTCGTTC CTCGAAGACG GCGATTCGCT CCGCATTCGC GGTTGGTGTC AGGGAGACGG CTATCGCGTC GGCTTCGGCC AGGTCGAGGG CTCGATCGTA GCCGTAGAAC CGGCCGGTAT TTTTGGACCA CCTCTCTTTT AA
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Protein sequence | MHPNDPKLCA FVDVDAASDF PIQNLPYGVF LTPEQPELRV GVAISNQILD LAVLEAAGLI RCDGVSGVFA KPSLNAFMAL GQTVWSQTRA RISELLRHDN PELRDNTNLR VRALVPQNLA QMYMPIHVAG FTDFYSSKEH ATNVGTMFRD KTNPLLPNWL HIPIGYNGRA STVVVSGTPI RRPRGQLKSP TAELPNFGPC QRLDFELEMG VVIGQASAMG EMLTERQAEE MIFGFTLLND WSARDIQQWE YVPLGPFQAK AFGTSISPWI VTREALEPFR VQGPAQEPRP LPYLHQAQPN NYDIQLAVDL RTEKMAKPAS ICRTNFKYMY WSSVQQLVHH ASSGCAMNVG DLLGSGTISG PEKGERGSML ELSWNGTKPL ELDGGERRSF LEDGDSLRIR GWCQGDGYRV GFGQVEGSIV AVEPAGIFGP PLF
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