Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0892 |
Symbol | atpC |
ID | 4031384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 985604 |
End bp | 986014 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637969405 |
Product | F0F1 ATP synthase subunit epsilon |
Protein accession | YP_576215 |
Protein GI | 92116486 |
COG category | [C] Energy production and conversion |
COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAGGT TCCAGGTGAG TCTCGTATCC CCGGAAAGCC TGTTATTTTC TGGCCAGGTT GACCAAGTTG ATCTGCCCGG CATCGAAGGC GATCTTGGTG TCCTTGCTGG TCACGCACCA ATCGTTGTGA TGCTTCGTCC GGGGATCGTG ACGACAGTCG CAGGAGATAT CAGGGACAGG TTCGTAATCC TCGGAGGCTT GGCGGAATTC TCGCAGGGAG AACTGACGAT CCTAGCGGAT TCAGCGTCGT CCGTCGATGG CTTTGATCTT ACTCGATTAA AGGCGCAGAT CGACGAGATG CAGGAAAGCC TCGCAAAGCA ATCCGTTGGC GACGAACTCG ATCGAGCTGT TGCCAAGTTC GATCACTTCA AGGCAATCCA CACTGCTCTG GCCCCGGCGA CCGCCTTCTA G
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Protein sequence | MTRFQVSLVS PESLLFSGQV DQVDLPGIEG DLGVLAGHAP IVVMLRPGIV TTVAGDIRDR FVILGGLAEF SQGELTILAD SASSVDGFDL TRLKAQIDEM QESLAKQSVG DELDRAVAKF DHFKAIHTAL APATAF
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