Gene Nham_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0889 
Symbol 
ID4031381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp980639 
End bp982909 
Gene Length2271 bp 
Protein Length756 aa 
Translation table11 
GC content57% 
IMG OID637969402 
Productformate acetyltransferase 
Protein accessionYP_576212 
Protein GI92116483 
COG category[C] Energy production and conversion 
COG ID[COG1882] Pyruvate-formate lyase 
TIGRFAM ID[TIGR01255] formate acetyltransferase 1 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGCAA GCGCAGCCCT GAGGAAGGAA GCTAAGGCCG GTGATTGCTG GAACGATTTT 
CAGCCTGGAG ATTGGCTCAG TTCCATCAAC GTTCGCGATT TCATCGTACG AAACGTTGCG
CCTTACACAG GCGACGAAGC TTTTCTCACT GGACCATCGC AGCGCACCAA GGCCGTCTGG
GCGAAATTGC AGCCGTACTT CGCCGAGGAA CGGAAAAAGG GGGTGCTTGC AGTCGATGCT
CAAACTCCCT CGACATTGCT TGCACACAAG GCCGGCTACA TCGATCGCGA CAACGAAATC
ATCGTGGGTC TTCAGACCGA CCAGCCTTTC AAGCGGGCGA TTTTCCCCTT CGGCGGCTTG
CGGATGGTCG AAACGGGCCT CAAGGCGGCG GGCTACGAGC CCGACCCGGC TGTTCACGAG
GCTTTCACGA AATACCGAAA ATCACACAAC GACGGCGTCT TCGACGCCTA TACACCTGAA
ATCATGAATT GCCGAAGGTC CGGGATTATC ACCGGCCTGC CGGATGCTTA CGGTCGTGGC
CGTATTATTG GGGACTACCG GCGGGTAGCT CTTTACGGGA TCGACCGCCT TCTCGCGGCC
AAGCGAGCCG AGCGGGAACA GATCGATGAC ATGTGGCCGA GTGATGACAT CATTCGGTTA
CGCGAAGAAC TGTCCGACCA GATGCGCGCG CTCGAAGACC TCTCCTCGAT GGCCAAGCTT
TACGGCCACG ACATATCGAA GCCTGCTCGC AATGCCCAGG AAGCATTTCA ATGGACCTAC
TTTGCCTATC TGGGGGCAAT CAAGGAGGCC AATGGGGCAG CAATGTCCAT CGGCCGTATA
TCGAGCTTCC TCGACATCTA CATCGAGCGG GATCTGAAGC AGGGCGTTTT GGACGAAGGC
AAAGCTCAGG AACTTTGGGA TCAGCTGGTG CAGAAGCTTC GCATAGTCCG TTTTCTGCGC
ACGCCCGACT ACGATGCGCT GTTTAGTGGA GACCCTTATT GGGCGACCGA GTGCGTCGGC
GGTATGGATC TGGACGGACG CACGCTGGTG ACCAAGAGCA GTTATCGCAT GCTGCATACG
CTTACAAATC TTGGCCCGGC ACCCGAACCG AACATTACAG TTCTGTGGTC CAACCATATG
CCCGCAACAT TCAAGCGCTA CTGCGCCAAG GTCAGCCGCG ATACATCATC TCTTCAGTAC
GAGAATGACG ATCTCATGCG TCAGTTCTGG GGTGACGATT ATGGCATTGC CTGTTGCGTT
TCGGCGATGC GCCTGGGCAA GCAGATGCAG TTTTTCGGTG CCCGCGTAAA CCTGGCGAAG
GCGCTGCTGT ATGCGATCAA TGGCGGTCGC GACGAAGTCT CAGGCGAGCA GGTAGCTCCC
CGGACGCTGC CGGTCGCGGG CGACTTCCTC GACTACGACG ATGTGATGGC CAAGTTCGAT
ACCATTATGG AGTGGCTGGC ACGCACATAT GTCCACGCGA TGAACTGCAT CCACTATATG
CACGACAAGT ATTTCTACGA ACGCCTGGAG ATGGCGCTCC ATGATCGCGA TATTCTCAGG
ACCATGGCAT TCGGCATCGC CGGCCTGTCG GTGGTGGCCG ATAGCCTCAG CGCGATCAAG
TACGGCAAGA TCCGCGTGGC CCGCGATGCG GCAGGATTGG TGGTTGATTA TCAGAATGAG
GGGAATAAGG CGACGCCGCA ATTCGGCAAC AACGACGACC GCGTTGATCA AATAGCGTCG
GACATCGTCA CCAGCTTCAT GGGAAAGATA CGAAAGCACC CAACCTACCG CAATGCGACG
CACACACAGA GCGTGCTCAC CATTACTTCG AACGTAGTTT ACGGCAAGGC TACGGGAAAT
ACTCCCGATG GCCGCCGCAA GGGCGAGCCG TTCGGGCCGG GCGCGAACCC GATGCACGGT
CGAGACAGCC ACGGCTGGCT CGCCTCATGC CTGTCGGTTG CAAAGCTTCC CTATAAAGAC
GCGCAGGACG GCATTAGCTA CACGGTTTCC GTCGCTCCAC AGAAGACGCA TCTGTCGGAA
GGCCAGCTGA TCGATGAAGC CGTCAAGGCG TTCGACGTCT ACTTCGATCG AGGCGGATTC
CATATGAATC TGAACGTGAT TGATAGAGAT ACGCTCGAGG ATGCGATGAA GAATCCGGAT
AAGTACCCTC AGCTCACCAT TCGAGTCTCT GGCTACGCCG TCAACTTCGT CCGCCTTACG
CCGGAACAGC AGAGAGATGT GATCAGCCGC ACTTTCCACG GCCAGATCTG A
 
Protein sequence
MKASAALRKE AKAGDCWNDF QPGDWLSSIN VRDFIVRNVA PYTGDEAFLT GPSQRTKAVW 
AKLQPYFAEE RKKGVLAVDA QTPSTLLAHK AGYIDRDNEI IVGLQTDQPF KRAIFPFGGL
RMVETGLKAA GYEPDPAVHE AFTKYRKSHN DGVFDAYTPE IMNCRRSGII TGLPDAYGRG
RIIGDYRRVA LYGIDRLLAA KRAEREQIDD MWPSDDIIRL REELSDQMRA LEDLSSMAKL
YGHDISKPAR NAQEAFQWTY FAYLGAIKEA NGAAMSIGRI SSFLDIYIER DLKQGVLDEG
KAQELWDQLV QKLRIVRFLR TPDYDALFSG DPYWATECVG GMDLDGRTLV TKSSYRMLHT
LTNLGPAPEP NITVLWSNHM PATFKRYCAK VSRDTSSLQY ENDDLMRQFW GDDYGIACCV
SAMRLGKQMQ FFGARVNLAK ALLYAINGGR DEVSGEQVAP RTLPVAGDFL DYDDVMAKFD
TIMEWLARTY VHAMNCIHYM HDKYFYERLE MALHDRDILR TMAFGIAGLS VVADSLSAIK
YGKIRVARDA AGLVVDYQNE GNKATPQFGN NDDRVDQIAS DIVTSFMGKI RKHPTYRNAT
HTQSVLTITS NVVYGKATGN TPDGRRKGEP FGPGANPMHG RDSHGWLASC LSVAKLPYKD
AQDGISYTVS VAPQKTHLSE GQLIDEAVKA FDVYFDRGGF HMNLNVIDRD TLEDAMKNPD
KYPQLTIRVS GYAVNFVRLT PEQQRDVISR TFHGQI