| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0877 |
|---|
| Symbol | |
|---|
| ID | 4031426 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 970033 |
|---|
| End bp | 970866 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637969392 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_576202 |
|---|
| Protein GI | 92116473 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2326] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.114616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTTCG ATCTGAAGCA GCGGAAGGTG AGCATGTCAA CCGACGCGGA CACGCCACGG
ATGAAGCGGA AGGCCTATGA GAAGGAGCTG GGAAAGCTCC AGGTCGAGCT TTGCTACCTC
CAGGAATGGG TGAAGGCGAA CAAGCTTCGG ATCATCGTCC TGTTCGAGGG CCGGGATGCC
GCCGGCAAGG GCGGCACGAT CAAGGCGATT ACGGAGAAGG TCAGTCCGCG CGTGTTTCGC
GTCGCCGCCT TGCCAGCTCC GTCCGATCGC GAGAAAACGC AGTTATTCCT TCAACGCTAC
ATGCAGTATT TTCCGGCTGC AGGTGAAATC GTGATCTTCG ACCGGAGTTG GTACAACCGC
GCCGGCGTAG AGTATGTGAT GGGCTTCTGT ACGCCGGCCG AGCACAAACG ATTCCTTTCC
CTCTGTCCCC AGATGGAAAA ATATATCATC GAAGGGGGCA TCATCCTGAT CAAACTCTGG
CTTGAGGTCG GAATGGGCGA ACAGGAGCGT CGCTTCAAGG CGAGAATCGA CGATCCGCTG
CGGCAATGGA AGTTAAGTCC GATGGATACG GAATCCTACC GACGATGGTA CGACTATTCG
GAGGCGCGAG ACCTGATGCT GAAGGCGACA AGCACGAAGG ACTCGCCATG GTACATCGTT
CGCTCCGACG ATAAGCGCCG AGCACGGCTG AACTGCATCG CGCATCTGCT AAAGTTGATT
CCGCATAAAC GCATGCATCG GGATAAGATC AAGCTGCCAA AGCGTTCCAC GAAGGAACGC
TTTGACGACC AGGCGGGCCT GCGTGGGATG ACGTTCGTGA CGGAACGTTA CTGA
|
|---|
| Protein sequence | MEFDLKQRKV SMSTDADTPR MKRKAYEKEL GKLQVELCYL QEWVKANKLR IIVLFEGRDA
AGKGGTIKAI TEKVSPRVFR VAALPAPSDR EKTQLFLQRY MQYFPAAGEI VIFDRSWYNR
AGVEYVMGFC TPAEHKRFLS LCPQMEKYII EGGIILIKLW LEVGMGEQER RFKARIDDPL
RQWKLSPMDT ESYRRWYDYS EARDLMLKAT STKDSPWYIV RSDDKRRARL NCIAHLLKLI
PHKRMHRDKI KLPKRSTKER FDDQAGLRGM TFVTERY
|
|---|
| |