Gene Nham_0859 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0859 
Symbol 
ID4031679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp952111 
End bp952623 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content57% 
IMG OID637969376 
ProductXRE family transcriptional regulator 
Protein accessionYP_576186 
Protein GI92116457 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCCCC AATTGGGGGG AGACCGGCAC TGCCACGCAA ATCAATGTGA TAGGCGGCTA 
GGCCACACGA TGGAGGAAGC TATGTCCATC GAAAGCATTC TGAGGCGGAA GGGCACCGAC
GTCACAACAA TAGGTCCGGA AGCCAATATC AAGAGCGCGG CGGGCTGGCT CCGCGCAAAG
AATATTGGCG CTCTCGTGGT GACGAGTGGG GACGCAATTC TTGGCCTCAT TTCCGAACGT
GAAATCGTTG ATGCATTTTT TCGCTACGGC GAGACTGCCG GGTCGATGCG TGTGAAGGAA
ATCATGCAAC GCGGTGTGAC CACCGTGTCC CCGGACGAAA GTGTCACTCG CGTGATGAAC
CTGATGACGC ACCATCGCGT GCGACACTTG CCGGTACTAC TCGGCGGCAA GCTGGCCGGT
ATCGTCAGCA TCGGCGATGT AGTCAAGTAT CGGCTGGAGG AACTGGAGCT TGAGACGAAC
GTCCTACGTG ATGCCTACAA CACCTCGCGT TGA
 
Protein sequence
MLPQLGGDRH CHANQCDRRL GHTMEEAMSI ESILRRKGTD VTTIGPEANI KSAAGWLRAK 
NIGALVVTSG DAILGLISER EIVDAFFRYG ETAGSMRVKE IMQRGVTTVS PDESVTRVMN
LMTHHRVRHL PVLLGGKLAG IVSIGDVVKY RLEELELETN VLRDAYNTSR