Gene Nham_0836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0836 
Symbol 
ID4032703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp926998 
End bp931308 
Gene Length4311 bp 
Protein Length1436 aa 
Translation table11 
GC content61% 
IMG OID637969361 
Producthypothetical protein 
Protein accessionYP_576171 
Protein GI92116442 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATCA ACCGTAAAGG CAATCGGACG GGCTCACGCA TATGTCTCCC TTGCAGCGCC 
CTTCTGTTGC TCTGGCTTTT AATCTTGCCG GCTTTGTCGG CTGAAACTGG AAGCCGCGCA
CAACAGGACA CCCCGGTCAC ATGCTCGAGC GGATTTCTGC CGGCTGCGGG ATCCGCAAGT
AGTCCGCCCG ATCTTCTGGT CACCGGCGAG TGCCACGTCA AACCCGATCA GACGTACTAC
TTCGAGAACG TCAACGTTCT CGACAAAGGC CGACTCGTGT TCGACGAGCT TGATAAGACG
ATCAAGCCCA CGGCCACCCA CTTCTGGGTT CAATCGATGG TGATCGAGAA CGGCGGGACG
GTTGTCGCCG GATCATGGAG AGAGCCCTAT GGGAACTACG GGGGCGTCCT GACGATTCAT
CTTTATGGCG TCGACCGCAA CGCGAACGGT CCCGCGCTTG GCGCTCTTTG CCGGACCGCG
CAGAACGCCG ATACGGGCCC CTGCGGTGTC CCGACGTCTG TCTGGAACGA CAATGGCAAG
ACGAAGCTCG CGCTGCCCGG CGGTGTCTCG GACTTCTTCT ACCGCTACGG ACCGCTGCAC
GGTGACGGCA AGTGCTCCGA TGGCTCGATC TGGTCGAGCA AATCGCCATG CGATGACAGT
CAAGGCAAGC AGGTTGGATA TTTCGGCTAC AAGGTTCTCG CCGTTTCCTA TGGCGGGAGC
CTCGAACTCT GGGGCTCGAA AGGCTCCTGC AACTCGATGG GCTGCTCCAA TCCGCAACTG
ACCCATCCGA GTTGGACACG GCTGGATGGT TCGCTTTCCC CAGGGGCCGG TGCAGGGCCG
AATGACCCGA TCGTCATCGC CGGCCCGAGC AACTTCAATC CCGAAAATCT TTATGTCAGA
GCCGGCGATC AGATCGTCGT CACAACGACC GACTATCTAC CCGGTCATTC CGAAACCTTC
GTCGTCAAGG AAGCCCGCAC GGGCGGAGAT GGGAAGGGAC GGTGGCTTAC GAAGATCCGG
GTCGATCATG GCGCGCAGTG GCACCATAAC GGCGAACGCT ACGCGCTCTC CGACAAGCTG
GCGCCGTCGC AGGGACGACT CCACCTCGAT CCGGATCTCG TCAAGAACGG TGTCGAAACC
CGTGCCGCCG TCGCCATTCT GAACCGCAGC ATCCGGATCG TCTCCGGAGG CGACGGGGCG
GGCGAGGAAT TTCCGGCCTC AACGCCCGAG AAGCCCTGTG TCGCGCAGGA CGGCAAGGGG
CCGTGCTATT CGCTCGGCGG CCATGTCGTG TTCCGGCAGG GATTCAACGC GGTTCACATC
AAGGGTGTCG AGTTCAAGCA ACTCGGACAG GGCGGACGGA TGGCGCACTA TCCGGTGCAT
TTTCATATGG CGCGCCAAAC GCCGGCAGGA ACCTACGTGC GGGATTCGTC GATCAACGAA
TCGATGACCC GCTGGATCGT GCTGCACTCA ACGCAAGGGG TCCTGCTTGC CGGCAACGTC
GGCTACAAGT CGATCGGCCA CGGCTTCTAT CTCGAGGACG GAACCGAGAC CGACAACAAG
CTTTACGGCA ACCTCGGCAT TCTCGCGCGC GCCGCGGTGG CCAATGCGCA AAATCCGCGA
TTAATCCCGG GCATCCTCGC GGCCAATGAA GACAAAAAAG CGGTCCCGAA ATTTCCCTAC
CTGACTGACT CGGCCTATCC GTCCGTCTTC TGGATCACGA ACGGCTGGAA CGAGTTCATC
GGCAATATGG CGGCTGGCGC CACGGCCTGC GGATCGGCCT ACTGGTTCGT GCCGGCCTGG
AACAGTGACA GGCCGGACGT GATGACCGGC AGCAACAACT CCGGTGGGCA CATGAAGTGG
TCTGGTTATG CCGGCCTGCA AAAGGATGGC GCTTACCAAG GATCGACGCC GCTCAAGGCC
TTCGTTGGCA ACTTCGCCAC CTCGACGATG ATGTCCTTCC AGACGACCGG CGACGCACCG
GATTGCTCGG GCGTCGTCAA GCCTAACTCC GCAAAGGTGA GCGCGCCTGC TCCCAACGTT
CTCACGGCGG TCCGCAGCCT CGCGCCCGAT CCGAACGACA ACGTCGCTGA AGATCACTAC
TATCCGCACG CCTTGGGCGG AAACCGGCAC GCGACGGCAT GCAAGCGGAA GGATGACGGG
ACCTACGATT GCGAAGGGAT CAAGTTCTGC GATCCGGGCC ACGCCGAAAA TTGTGCGGTG
ACCGTCATCG ACAAGTTCAC GTCGATGTTT CACTGGGCCC AGCACAATGT CGCGGCGATC
TGGCTGCGCA ACCAGTGGTA TCTCGTCGCC AACAGCGTGC TGTCGGACGT TCAGAACGGT
GGCCTGACCT TCATCACCGG CGGCGATTAT ACTCATGCGT CCGTGATCCG GGGCTATTGG
GCGCTCGCGC GCAAGAGCGT TTTCATCGGC CATACCCAGC CGCAGGATGA CGCCCATGCC
TTTGCGCTGG ACGCGGGGCC GTTCAACGCC CGTTCGAAGC TGCGTTGCGA CTGGCAGGTG
GCCGGCCTTG CGCCGAGCAA CTATTGCCTC AGCGCAAAGG ACGGCATTTC CATTCCGCTG
GTCAATTTCG ACACGGGCCA GCGTCTCTTC AACATCTACG ACGGTCCCGC CTATCAGGAT
TCCAACGCCT ACTTCGACAT CACCAAATCA GACTGTCCCG TGACCGGGGC GAGCACCAAT
CCGGGCTGCA TGTACGGCTC TGGCGTCGTC ACGGGCGTGA CCAAGGATCC GTTGAATGGG
CAATGCTATC TGCCGAACGC GGCCATCGGA TGGAAGCAGA GCAACGGCTT CTTCTATCCA
CCCGCCTTTC ATTCGACGAA CCTCTATTTC AGCAACGTCG ACATCCGTCA TTTCGTTTTT
GACCCGTTGT TTCAGGCGCC CGATGGCGTG ACGGGGGAAA AGGACTTTGG TCAGGGCGGC
ACCTATATCA CGGCGACCTC TGGACCGAAC GCGGTGAAGA ATTTCTACTG CACCTCGACG
GACAACATGT TCGACGGCTG GAGCGGGATC GACCGGCAAA CCGAGCTCAC CGACGACGAC
GGTACGCTGA CGGGACTCAT CAGTTCGAAG CCCGGCGGGG AGACGGTGTC GATCAACGAG
GATCAGTTCT TCACTGCCAA GCTTGAAACT TCCGAGTGCA GGTCGAACCT GAGGGTCGGC
CCCTCGCTGG TGTGTCCGCA AAAGCCCCCG CCACCCGCGT CCGCGCCCTC GACCGCCAAG
ACGAGCCCTT ATGATTATGT GGCGACGGCG ATCGCGCCGG AATGCTCGCA GAACTCGCCG
CCCAATCCGC CTCAACCATA CGGCCGCTGC GGAGACTCGC AGGACCTCGG CCAGGGAGGC
GAGTGGTCGA GCGAGTGCTC GAACGGGGCA TGTTATGGCG TACCGCTTTT CCGGCAGTAT
CTGACAACCC CCGAACTGGG TCATTGGCAG ACCAATGGCT GCGCCGGAAA CGCCAATACG
CCCGCGTGCC GCTGGCCTTT CATGCGCATG GGCGGTCAGA ACATGTACCA GCGCGAGACG
TTGACCGTAA ACAACGGGCT CTACTACGTC GACACGTCTA TCTCCAAGGA CACACAGAAC
AAGGAGAATT ACACGAAGAT GCCGCAGACG CGGGATGTGA ATGTCTTCGC TCCCGGTCAG
ACCTATTACA TGTTCTTCCT CTATGCGAAG CCGACCACGG CCCAGACCTA CCAGATCTAT
GTTGGCGACG GCTTTGATAC GGCAACCGTG AAGCCCGTGC GCGGAAGCCT CGCGACCGCG
CCGATCAAGT TCAGTCCGGA CTCTTCGCCC AATGCGGGGA AGTGGTTCAC TGTGAAAGGC
GTCTCCAAGG GCATTGTGAC CATCGAGACC AATTTCGCCG GCCAGTCCGA ACTCGATCCG
AAGCAACAGA AGAACGGGCT TTGCGGTCCG GCGAGCTTCT GCGGCTGGAA GGCGGACGGG
AACTGCGGCT CGAAGCTTGC GGCCTCGGAT CCTCGAAAAG AGCCGTTGCT CGTCGCCGAC
CCGGCGCTGG CCAAGGAAGC GGACGCGGTT TGCAAAACCT GGGCAGTCAA GGATCTCGAT
TGCCCGTCGG CCGGATGTTT CGGCTTTTCG TTCACGCTTC CAGCCGGTTT CAGTGCGCAA
GACCAGGGGC AGGCGGCGCG TCCGGCGCCG ATCGCATTCC CCGAAACCGG CGAATTCGCA
ACGCGCTTCC TCAACACCAA GCTCGTCCCC GACAACGCAA GCCATGCTAG GGACGGGGTC
GAGACGGAGT GTTTCTATCC GAGGCTGCCG GGCAGTTGCC CGGCGCAATA G
 
Protein sequence
MHINRKGNRT GSRICLPCSA LLLLWLLILP ALSAETGSRA QQDTPVTCSS GFLPAAGSAS 
SPPDLLVTGE CHVKPDQTYY FENVNVLDKG RLVFDELDKT IKPTATHFWV QSMVIENGGT
VVAGSWREPY GNYGGVLTIH LYGVDRNANG PALGALCRTA QNADTGPCGV PTSVWNDNGK
TKLALPGGVS DFFYRYGPLH GDGKCSDGSI WSSKSPCDDS QGKQVGYFGY KVLAVSYGGS
LELWGSKGSC NSMGCSNPQL THPSWTRLDG SLSPGAGAGP NDPIVIAGPS NFNPENLYVR
AGDQIVVTTT DYLPGHSETF VVKEARTGGD GKGRWLTKIR VDHGAQWHHN GERYALSDKL
APSQGRLHLD PDLVKNGVET RAAVAILNRS IRIVSGGDGA GEEFPASTPE KPCVAQDGKG
PCYSLGGHVV FRQGFNAVHI KGVEFKQLGQ GGRMAHYPVH FHMARQTPAG TYVRDSSINE
SMTRWIVLHS TQGVLLAGNV GYKSIGHGFY LEDGTETDNK LYGNLGILAR AAVANAQNPR
LIPGILAANE DKKAVPKFPY LTDSAYPSVF WITNGWNEFI GNMAAGATAC GSAYWFVPAW
NSDRPDVMTG SNNSGGHMKW SGYAGLQKDG AYQGSTPLKA FVGNFATSTM MSFQTTGDAP
DCSGVVKPNS AKVSAPAPNV LTAVRSLAPD PNDNVAEDHY YPHALGGNRH ATACKRKDDG
TYDCEGIKFC DPGHAENCAV TVIDKFTSMF HWAQHNVAAI WLRNQWYLVA NSVLSDVQNG
GLTFITGGDY THASVIRGYW ALARKSVFIG HTQPQDDAHA FALDAGPFNA RSKLRCDWQV
AGLAPSNYCL SAKDGISIPL VNFDTGQRLF NIYDGPAYQD SNAYFDITKS DCPVTGASTN
PGCMYGSGVV TGVTKDPLNG QCYLPNAAIG WKQSNGFFYP PAFHSTNLYF SNVDIRHFVF
DPLFQAPDGV TGEKDFGQGG TYITATSGPN AVKNFYCTST DNMFDGWSGI DRQTELTDDD
GTLTGLISSK PGGETVSINE DQFFTAKLET SECRSNLRVG PSLVCPQKPP PPASAPSTAK
TSPYDYVATA IAPECSQNSP PNPPQPYGRC GDSQDLGQGG EWSSECSNGA CYGVPLFRQY
LTTPELGHWQ TNGCAGNANT PACRWPFMRM GGQNMYQRET LTVNNGLYYV DTSISKDTQN
KENYTKMPQT RDVNVFAPGQ TYYMFFLYAK PTTAQTYQIY VGDGFDTATV KPVRGSLATA
PIKFSPDSSP NAGKWFTVKG VSKGIVTIET NFAGQSELDP KQQKNGLCGP ASFCGWKADG
NCGSKLAASD PRKEPLLVAD PALAKEADAV CKTWAVKDLD CPSAGCFGFS FTLPAGFSAQ
DQGQAARPAP IAFPETGEFA TRFLNTKLVP DNASHARDGV ETECFYPRLP GSCPAQ