| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0780 |
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| Symbol | |
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| ID | 4031464 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 861343 |
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| End bp | 862272 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637969308 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_576119 |
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| Protein GI | 92116390 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACGC TTGTTCTCAC GCATCCCGCC AGTCTCGATC ATCTGATGCC GCTCGGTCAC
CCGGAGCGGC CGGACCGGAT TCGCGCCATC GATGAGGTGC TGGCCGAAGA TCGCTTCAAG
AGTCTGGCAC GCGGCGAGGC GCCGGAAGGC TCGCTGGATT CGGTCGCGCT CTGTCACAAC
GAGCATTACA TAGGCGAACT CCGGCACAGG TCTCCGGCGG AGGGTCTGGT TTATCTCGAC
AGCGACACCT CGATGTCGCC GGGGACATGG GAGGCGGTGA TGCGCGGCGT CGGCGGCGCT
ATCGCGGCGA CCGAGGCCGT CATCGCCGGC AACGCGAGCA ACGCGTTCGT CGCCACGCGC
CCGCCGGGAC ATCATGCCGA GACCGGCAGA GCGATGGGCT TCTGCTTTTT CGACCAGGCG
GCGATCGCGG CGCGCCACGC CCAGCGCAAG CACGGCATCG GCCGCGTGGC CGTGGTCGAC
TTCGATGTAC ATCACGGCAA CGGTACGCAG GATATCTTCT GGGCCGACCG AACGGTGATG
TACTGCTCGA CGCATCAGAT GCCGCTGTTC CCCGGCAGCG GCGCCAGCGG CGAACGCGGC
GATCACGATA CCATCGTCAA TGCGCCGTTG GCGTCGGGCG ACGGCGGGGC CAAATTTCGT
TCCGCGTTCG AGAACCTGAT CCTGCCGCGG CTGGAGACAT TCGCGCCCGA ACTGTTGGTC
ATCTCCGCCG GTTTCGACGC GCACAGTCGC GACCCGCTGG CGAGTCTCAA CCTGGATGCG
GACGATTTCG GGTGGGTGAC CCGCAAATTG ATGGATATCG CCGACGCGAC CGCAGGCGGC
CGAATTGTCT CGGTGCTCGA GGGCGGCTAT AATCTGCAAG GGTTGCAGGA GTCGGTGGCG
GCGCATGTCA CCGCACTCAT GGGCGCGTGA
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| Protein sequence | MTTLVLTHPA SLDHLMPLGH PERPDRIRAI DEVLAEDRFK SLARGEAPEG SLDSVALCHN
EHYIGELRHR SPAEGLVYLD SDTSMSPGTW EAVMRGVGGA IAATEAVIAG NASNAFVATR
PPGHHAETGR AMGFCFFDQA AIAARHAQRK HGIGRVAVVD FDVHHGNGTQ DIFWADRTVM
YCSTHQMPLF PGSGASGERG DHDTIVNAPL ASGDGGAKFR SAFENLILPR LETFAPELLV
ISAGFDAHSR DPLASLNLDA DDFGWVTRKL MDIADATAGG RIVSVLEGGY NLQGLQESVA
AHVTALMGA
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