| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0770 |
|---|
| Symbol | |
|---|
| ID | 4031454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 850232 |
|---|
| End bp | 851332 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637969300 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_576111 |
|---|
| Protein GI | 92116382 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.742046 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCACA ACACCTTCGG CCATCTGTTT CGGGTTACGA CCTTTGGCGA GAGCCACGGG
GTTGCGATCG GCTGCGTGGT CGACGGCTGC CCGCCGCAGC TCGCCCTGAC GGTTGAAGAG
ATCCAGCGCG ATCTCGATCG CCGTCGTCCC GGCCAGTCGC GCTTCACCAC GCAGCGGCAG
GAGGCCGATC AGGTTAAAAT CCTGTCCGGC GTGATGGAGA CCGCGAGCGG GCAGGTCACC
ACCGGCGCGC CGATCGCGCT GCTGATCGAG AACACCGACC AGCGTTCGAA GGACTATTCC
GAGATCAAGG ACAAGTTTCG TCCCGGCCAC GCCGACTTCA CCTATGAAGC CAAATACGGG
CTGCGCGACT ATCGCGGCGG CGGACGCTCG TCTGCGCGCG AGACCGCGAC GCGCGTTGCT
GCTGGCGCCA TCGCGCGAAA GATCGTGCCG GGCGTGACCG TGCGCGGCGC GCTGGTGCAG
ATGGGGCCGC ACAGAATCGA TCGCGAGAAA TGGGACTGGA ACGAGATCGC GAGGAATCCG
TTCTTCTGTC CCGACAAGGA CAAGGCCGCG TTCTTCGAGA GCTATCTCGA CGGTATCCGC
AAAAGTGGTT CGTCGATCGG CGCCGTGATC GAGGTGGTGG CCGAAGGGGT GCCCGCAGGA
CTTGGCGCGC CAATCTATGC CAAGCTCGAC GGCGACCTCG CCGCGGCGCT GATGAGCATC
AACGCGGTCA AGGGCGTCGA GATCGGCGCG GGCTTCGGCG CTGCGGAATT GTCCGGTGAG
GACAATGCCG ACGAGATGCG CAGTTCTTCG TCCAATATGG GCAACAACGG CCCCGTGTTT
CTGTCCAACC ACGCCGGCGG CATTCTCGGC GGCATCTCGA CCGGCCAGCC GGTGGTGGCG
CGGTTCGCGG TCAAGCCGAC CTCGTCGATC CTGTCGCCGC GCAAGACCGT CGATCGCAAC
GGCGCAGACA CCGATATCTT CACCAAGGGT CGCCACGACC CTTGCGTCGG TATCCGCGCG
GTTCCGGTGG GCGAGGCCAT GGTCGCCTGC GTGCTGGCCG ATCATTTTCT GCGTCATCGC
GGGCAGGTCG GCCCGCGCTG A
|
|---|
| Protein sequence | MSHNTFGHLF RVTTFGESHG VAIGCVVDGC PPQLALTVEE IQRDLDRRRP GQSRFTTQRQ
EADQVKILSG VMETASGQVT TGAPIALLIE NTDQRSKDYS EIKDKFRPGH ADFTYEAKYG
LRDYRGGGRS SARETATRVA AGAIARKIVP GVTVRGALVQ MGPHRIDREK WDWNEIARNP
FFCPDKDKAA FFESYLDGIR KSGSSIGAVI EVVAEGVPAG LGAPIYAKLD GDLAAALMSI
NAVKGVEIGA GFGAAELSGE DNADEMRSSS SNMGNNGPVF LSNHAGGILG GISTGQPVVA
RFAVKPTSSI LSPRKTVDRN GADTDIFTKG RHDPCVGIRA VPVGEAMVAC VLADHFLRHR
GQVGPR
|
|---|
| |