Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_0748 |
Symbol | |
ID | 4031432 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 828552 |
End bp | 829010 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637969280 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_576091 |
Protein GI | 92116362 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02803] TonB system transport protein ExbD, group 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCGTAT CGCTCAAGGA CCCGCAGAAC GGGGGCATCG ACGAGCTCAG CGAGATCAAC GTCACGCCGT TCATCGACGT GATGCTGGTG CTGCTGATCA TATTCATGGT GGCGGCGCCG CTGTCGACGG TGGACGTGGC GGTGGACCTG CCGATGTCCA ACGCCCAGCC GCTGCCGCGC CCGGACAAGC CGGTGTTCCT GACCGTCAAG CAGAACCTGA CGCTGGCGCT TGGCAATGAC AACGTGCCGC GCAGCGCCTT GCAGGCCACG CTGGATCAGC AGACCGGCAA TGACCGCGAG CAACGCGTGT TCCTGCGTGC CGACGGCGCG GTGGCCTACA GCGAGTTCAT GAACGTGATG AACCTGTTGC GCGACGCCGG CTATCTCAAG ATCGCGCTGG TGGGACTCGA GGACACCGGG CAGGTGGCGC CAACGCCGGT GGCGGCGACG CGGCCATGA
|
Protein sequence | MAVSLKDPQN GGIDELSEIN VTPFIDVMLV LLIIFMVAAP LSTVDVAVDL PMSNAQPLPR PDKPVFLTVK QNLTLALGND NVPRSALQAT LDQQTGNDRE QRVFLRADGA VAYSEFMNVM NLLRDAGYLK IALVGLEDTG QVAPTPVAAT RP
|
| |