Gene Nham_0748 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_0748 
Symbol 
ID4031432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp828552 
End bp829010 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content66% 
IMG OID637969280 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_576091 
Protein GI92116362 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02803] TonB system transport protein ExbD, group 1 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCGTAT CGCTCAAGGA CCCGCAGAAC GGGGGCATCG ACGAGCTCAG CGAGATCAAC 
GTCACGCCGT TCATCGACGT GATGCTGGTG CTGCTGATCA TATTCATGGT GGCGGCGCCG
CTGTCGACGG TGGACGTGGC GGTGGACCTG CCGATGTCCA ACGCCCAGCC GCTGCCGCGC
CCGGACAAGC CGGTGTTCCT GACCGTCAAG CAGAACCTGA CGCTGGCGCT TGGCAATGAC
AACGTGCCGC GCAGCGCCTT GCAGGCCACG CTGGATCAGC AGACCGGCAA TGACCGCGAG
CAACGCGTGT TCCTGCGTGC CGACGGCGCG GTGGCCTACA GCGAGTTCAT GAACGTGATG
AACCTGTTGC GCGACGCCGG CTATCTCAAG ATCGCGCTGG TGGGACTCGA GGACACCGGG
CAGGTGGCGC CAACGCCGGT GGCGGCGACG CGGCCATGA
 
Protein sequence
MAVSLKDPQN GGIDELSEIN VTPFIDVMLV LLIIFMVAAP LSTVDVAVDL PMSNAQPLPR 
PDKPVFLTVK QNLTLALGND NVPRSALQAT LDQQTGNDRE QRVFLRADGA VAYSEFMNVM
NLLRDAGYLK IALVGLEDTG QVAPTPVAAT RP