| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0741 |
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| Symbol | |
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| ID | 4031501 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 817140 |
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| End bp | 818849 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637969273 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_576084 |
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| Protein GI | 92116355 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.97893 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGGTC CTCAGCCGCT GCAATTCGTT GAGCATCTGC GCCGGAGCGG CCGCCTGAAA
GCGGCGGACG CGGAGCAGGT CACGTCTGTT GGTCCGGCAC AAGACGGCAC ACTGCGTTCC
GCACCGGGAG CGCCGCACGC CAAGCTTTGG GAAACGACCA ATCTATCGCC AACCGAATTC
GCCGATGAAG CGGCGAACTT CTTCGGTCAT CCCCGCGCCA GCCTGCAGGA GATGCTCTCG
GCAACGCCGC TGGTTTCGGC CTTCTCGCGG CGTTTCCTGC GCGAGACACT GGTGTTTCCT
TACGAGGTGG CAACTCGCGG TATTCACCTC GCCGTCGCCG ACCCGACCGA TCTTGCGGCA
CGACGGGCGG CTGAGATCGT GCTCGGGCCG GATATTTCGA TTACCCTCGC CTCGCCCGAG
GACCTCGCCG TTGCGCTGGA CCAGCGGCTC GTCGACGATA GTCCCGCCGC GCACGCGGAC
GCCGGCGGCG CGTCCGCGCT GCGCGAGGAC GACGTCGAAA GCCTGCGCGA CCTTGCAAGT
GGCGCACCGG TGGTCCGGGC CGTCAACGAC CTCCTGGAAA AGGCCGTGGA ACTGCGGGCC
AGCGATATCC ATATCGAACC GTTTCAGAGC GGACTCGTGG TTCGCCTGCG GATCGACGGA
ATGCTTCGAC CGATCACGCC GCCTGCCGGC GCGCTGCCGC AGGCCGTGAT CTCGCGCATC
AAGATCATCG CGAACCTCAA CATTGCCGAA CGGCGGCTGC CGCAGGACGG TGCGGCACGG
CTGCGCGCCG GCCGCGCCGA CATCGATATC CGCGTCGCCA TCATGCCGAC CCAGCACGGC
GAATCCGCCG TCATCCGCAT CCTGCCGAAG GATCGCGGAC TGCTCGTGGT CGAGAATCTC
GGTTTCGGGC AGGCCGACGA AACCAAGCTG CGGCGGCTGT TAAAGCTACC GCACGGCATG
ATCGTCATCA CCGGACCGAC CGGCAGCGGC AAGACCACGA CGCTCGCAAC CATCTTGTCG
ATCCTGAACG AACCGATACG GAAAATCCTC ACCGTGGAAG ACCCCGTCGA GTATGAAATC
CCCGGCATCA ACCAGTCGCA GATCAAGCCT GCGATCGGGC TGACCTTTGC GAGCGCGCTG
CGATCCTTCG TACGCCAGGA CCCCGACGTC ATCATGGTCG GCGAGGTGCG CGATGCCGAG
ACCGCGCATG TCGCCGTGCA CGCCGCGCTG ACCGGCCATC TCGTACTCAC CACCCTGCAC
ACCGAGACTG CGGCCGCGGC GCTGCCGCGC CTGCTCGATC TCGGCATCCA GGGATACCTG
TTGCGCTCCA CCTTGCGCGC GGTGATCGCC CAGCGCCTGG TGCGCCAGCT CTGCGAACGC
TGCAAGTCAC AAAAAACCCT GATGGATGCC GACCTCACCG ACGATCCGCG GCTTGTCACA
CTCGGTTTCC GGCCGGGCGA GACGGTGCAT GTGCCTTGCG GATGCGAACG CTGCGGCAGC
AGCGGCTATC GCGGCCGGCT CGGCGTGTTC GAGGTGCTCG AACTCGACCA CACCTTGCGC
GATCTGATCG GGGAGAAGAC CGACGGGCTG GAGGTCGATC AGGCCGCAAT CCGCGGCGGC
ATGACCACGA TGCTCGATGA CGGCATCGCC AAATGCCGCG CCGGATTGAC GAGCCCGGCG
GAAATCCTTC GCGTCACGAC CGCGCGATGA
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| Protein sequence | MIGPQPLQFV EHLRRSGRLK AADAEQVTSV GPAQDGTLRS APGAPHAKLW ETTNLSPTEF
ADEAANFFGH PRASLQEMLS ATPLVSAFSR RFLRETLVFP YEVATRGIHL AVADPTDLAA
RRAAEIVLGP DISITLASPE DLAVALDQRL VDDSPAAHAD AGGASALRED DVESLRDLAS
GAPVVRAVND LLEKAVELRA SDIHIEPFQS GLVVRLRIDG MLRPITPPAG ALPQAVISRI
KIIANLNIAE RRLPQDGAAR LRAGRADIDI RVAIMPTQHG ESAVIRILPK DRGLLVVENL
GFGQADETKL RRLLKLPHGM IVITGPTGSG KTTTLATILS ILNEPIRKIL TVEDPVEYEI
PGINQSQIKP AIGLTFASAL RSFVRQDPDV IMVGEVRDAE TAHVAVHAAL TGHLVLTTLH
TETAAAALPR LLDLGIQGYL LRSTLRAVIA QRLVRQLCER CKSQKTLMDA DLTDDPRLVT
LGFRPGETVH VPCGCERCGS SGYRGRLGVF EVLELDHTLR DLIGEKTDGL EVDQAAIRGG
MTTMLDDGIA KCRAGLTSPA EILRVTTAR
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