| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0740 |
|---|
| Symbol | |
|---|
| ID | 4031500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 815918 |
|---|
| End bp | 817129 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637969272 |
|---|
| Product | type II secretion system protein |
|---|
| Protein accession | YP_576083 |
|---|
| Protein GI | 92116354 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1459] Type II secretory pathway, component PulF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAACT TCCGCTACCG CGCACTGACG CAGAATGGCG AGATCGTGCA CGGCACGCTG
TCGGCGCCGA CCGCGGCGGA GGTGGCGACC AGGATCGAAT ATCTGCGCCT GCTGCCGATC
GAGACGACCG AGGAAAAGCG TTCCGTCTCG GCCTCCAGCG GCTTTTCCCC ATTCAGCCGG
CCGAGCCCGG CGGAAGTGAC GACCTTCACC CGCGACCTGG CGCTGCTCCT GAAAGCCAGC
GCGCGGCTCG ACGACGCACT CGAACTCTTG TCGAACGACG CCGACGTCGG GCGGCTGCGT
CCCGTTGTCG GCAAGTTGCG CGCGGCATTG CTCGGCGGCG AGAGTTTTGC CGAGGCGGTC
GCCGCGCATC CAATACTGTT TCCGCCGATG TATGTGGCTC TGGTGCGGGT CGGCGAAGTG
TCCGGCACGC TGGACCAGGT GCTGGAGTTG TTGGGCGCCG AACGCGCCCG TGCCGAACAG
ATGCGTCGCA AGCTGACGGA TGCGATGCAA TATCCCCTAT TCGTGCTGGT CGCCGCGGGC
GGCGTCATGT TGTTCTTCAT CCTGTTCGTG CTGCCGCAGT TCTCCGTGGT GCTGCAGGAT
TTCGGAGGAA AATCCGATTC CGCGCTTCGC GTATTCCTGC GACTTTCGGA TTTCATGCGC
GCCAACGCGA CCGCGCTCCT GCTCGCGGCC GCCTGCCTGA TCGGTGCGAT CTGGTTTGCC
TGGCGCCGGC CCGCGGTGAA AGCGGCCGGA ATCGGCGCGG TGGCGCGGCT GCCCGGCATC
GCCGGCATCT TCCAGTTCTA CCGGACCAGC CTGTTCTGCC GCAATCTCGG CGTCCTGCTC
GGCAGCGGCG TCAGCCTGAC CACCGCCTTG CGCATCCTGA TCGACATCAT GGCGGTCGCC
GGCAATGCCG AGGTCTGGAC CGCTGCAGCC GAACGCGTGC GGCACGGCGG CAAGCTGTCC
GAAGCGCTCT CGACCTCGAG CAGCCTTCCG CCGATGGCGG TGCGGATGCT GCGACTCGGC
GAGGAAATCG GGCAACTGCC GGTGCTGGCC GGCCGGGTCG CCGAATTCTA CGAGGCGAAG
CTGCAGCGCA GCCTCGATCG CGTCGTCAGC ATCATCGGAC CGCTTGCGAT CGTCGCCATC
AGCACCGTCG TCGGCGGGCT GATCGTCTCC GTCATGACTG CACTGTTGTC GGTCACGCAA
CTTGTTGGAT AG
|
|---|
| Protein sequence | MPNFRYRALT QNGEIVHGTL SAPTAAEVAT RIEYLRLLPI ETTEEKRSVS ASSGFSPFSR
PSPAEVTTFT RDLALLLKAS ARLDDALELL SNDADVGRLR PVVGKLRAAL LGGESFAEAV
AAHPILFPPM YVALVRVGEV SGTLDQVLEL LGAERARAEQ MRRKLTDAMQ YPLFVLVAAG
GVMLFFILFV LPQFSVVLQD FGGKSDSALR VFLRLSDFMR ANATALLLAA ACLIGAIWFA
WRRPAVKAAG IGAVARLPGI AGIFQFYRTS LFCRNLGVLL GSGVSLTTAL RILIDIMAVA
GNAEVWTAAA ERVRHGGKLS EALSTSSSLP PMAVRMLRLG EEIGQLPVLA GRVAEFYEAK
LQRSLDRVVS IIGPLAIVAI STVVGGLIVS VMTALLSVTQ LVG
|
|---|
| |