| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_0737 |
|---|
| Symbol | |
|---|
| ID | 4031497 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 814548 |
|---|
| End bp | 814964 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637969269 |
|---|
| Product | general secretion pathway protein I |
|---|
| Protein accession | YP_576080 |
|---|
| Protein GI | 92116351 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.180692 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCGACCG TTCGACACGC AGCAATTGAC CGGCACGATG CCGGCTTCAC GATCCTGGAG
GTGCTGATCG CGCTCGCGAT CGTCGCCGCC TCGATCGTTG CGATTGGAAC GGTGATGGCC
ACCAACGTAC GCGGCGTGCG CAAGCTGGAA GACCGCGTCG CCTTGATGCA GACCGCGCAG
GCGGTGCTGG TGACTGCGAT ACCGCCGCGC AAGGATCTCG CGGAGGGAAG GCTTTCCGGT
GAACTCCGCA ACTATCGCTG GCAGGTCGAT ATCGGCCCGG TGGGCGGCGA CTTTGCTGCC
GAGAATGCCA AGATCCTCTG GATCCCAAAA CTGCTGAAGG TCCGCGTCCG CTCGCCTTCC
GGCGCCATGG TCGAGCTTGC GACCGTTCGC TTGATACGCA AGGCACCCGG CCAATGA
|
|---|
| Protein sequence | MSTVRHAAID RHDAGFTILE VLIALAIVAA SIVAIGTVMA TNVRGVRKLE DRVALMQTAQ
AVLVTAIPPR KDLAEGRLSG ELRNYRWQVD IGPVGGDFAA ENAKILWIPK LLKVRVRSPS
GAMVELATVR LIRKAPGQ
|
|---|
| |